| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si016438m |
| Family | GT5 |
| Protein Properties | Length: 742 Molecular Weight: 83394.2 Isoelectric Point: 7.2578 |
| Chromosome | Chromosome/Scaffold: 1 Start: 40927300 End: 40934512 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 263 | 661 | 0 |
| HVVHICSELDPISSCGSLSTYVAGVSCAVQGKGNLVEVILPKYTSINMDGIHGLRKAEAEYESYFGGIWHKNRIWTGTSSGVGLILIEPVQLSYFNRDML RGYPDDFERFSYFSRASLDYIVKSGKQPDILHIHNWETAIVAPLFWDIFAHQGLENTRILLTCQDLNSQCLEEPNKVEMCGLDPRKLHRADRLQDPNKTH LVNILKGGIVYSNKVVLMSSIHSRDVLIQGSRHGLEATLTAHKEKILVASHGLDGELWYPSKDIYLPRRYSANDIEGKSICREALKRRLGFSSGSSIIVG CICDGYSDIHNLKEAVHVALRKNAQVIFMEKLGSVVNSTVRALKEEFINLDDDIAFVEEYNETLAHLIYAGSDIILCSSFEDPSLQIAVKAIKYGCAPV | |||
| Full Sequence |
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| Protein Sequence Length: 742 Download |
| METTRLVVGA AMRAPPPPPP APQFRRRRRL PHPRGGAHCP LFARAARPTL LTRCSYSRKG 60 NGNPRGTPRR ESSSTVRLDV EESSDQGTDL ASEQRKGDIM ELFSQAQRNI LSLNKQRLLA 120 MEELKKLQDE NKSLLQEIEV LETEVQGVPL EAVQSSTFCE LLLRIDTMVV SGMISMQEAS 180 DLREKVVNNR SIIQSTFSEI HHKANTELLS ELRLFLRKPI EYATSYLCPN CNSYCLSFKV 240 SAILYSCIWS SNLFNLNLRK SLHVVHICSE LDPISSCGSL STYVAGVSCA VQGKGNLVEV 300 ILPKYTSINM DGIHGLRKAE AEYESYFGGI WHKNRIWTGT SSGVGLILIE PVQLSYFNRD 360 MLRGYPDDFE RFSYFSRASL DYIVKSGKQP DILHIHNWET AIVAPLFWDI FAHQGLENTR 420 ILLTCQDLNS QCLEEPNKVE MCGLDPRKLH RADRLQDPNK THLVNILKGG IVYSNKVVLM 480 SSIHSRDVLI QGSRHGLEAT LTAHKEKILV ASHGLDGELW YPSKDIYLPR RYSANDIEGK 540 SICREALKRR LGFSSGSSII VGCICDGYSD IHNLKEAVHV ALRKNAQVIF MEKLGSVVNS 600 TVRALKEEFI NLDDDIAFVE EYNETLAHLI YAGSDIILCS SFEDPSLQIA VKAIKYGCAP 660 VQINFPNDGS RQSEGRDCRN RVMSKYIIST YGEFSLLQAL DSFNDPSSWD QQIKDGMAKG 720 LAWDAECYDL HWEAYSSLRK L* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 2.0e-6 | 69 | 207 | 158 | + transferase, transferring glycosyl groups | ||
| PRK00654 | glgA | 4.0e-58 | 262 | 740 | 506 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 8.0e-67 | 263 | 728 | 500 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 1.0e-69 | 262 | 738 | 497 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 7.0e-89 | 107 | 725 | 639 | + transferase, transferring glycosyl groups | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK98690.1 | 0 | 41 | 741 | 36 | 720 | AC069158_2 Putative starch synthase [Oryza sativa Japonica Group] |
| GenBank | ACC78131.1 | 0 | 41 | 741 | 36 | 700 | starch synthase V precursor [Oryza sativa] |
| GenBank | EEC74203.1 | 0 | 41 | 741 | 34 | 697 | hypothetical protein OsI_09361 [Oryza sativa Indica Group] |
| RefSeq | NP_001048453.1 | 0 | 341 | 741 | 4 | 403 | Os02g0807100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001123603.1 | 0 | 1 | 741 | 1 | 701 | starch synthase V [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3guh_A | 3e-22 | 262 | 723 | 1 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 2r4u_A | 3e-22 | 262 | 723 | 1 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 2r4t_A | 3e-22 | 262 | 723 | 1 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 2qzs_A | 3e-22 | 262 | 723 | 1 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3cx4_A | 8e-22 | 262 | 723 | 1 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EL455989 | 286 | 260 | 544 | 0 |
| EY766100 | 277 | 276 | 551 | 0 |
| JG919461 | 155 | 397 | 551 | 0 |
| JG919461 | 109 | 568 | 675 | 0 |
| JG919461 | 9 | 389 | 397 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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