Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si016472m |
Family | GH35 |
Protein Properties | Length: 717 Molecular Weight: 78963.8 Isoelectric Point: 9.367 |
Chromosome | Chromosome/Scaffold: 1 Start: 3196865 End: 3200969 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 43 | 332 | 0 |
LVINGRRRILISGSIHYPRSTPEMWPGLIQKAKDGGLDVIQTYVFWNGHEPVQGQYHFADRYDLVRFIKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLK YVPGIRFRTDNGPFKAAMQKFVEKIVSMMKSEGLFEWQGGPIIMAQRRPALCNWAAQMAVGTNTGLPWVMCKQDDAPDPVINTCNGFYCDYFTPNKKYKP TMWTEAWTGWFTKFGGAVPHRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIANSYDYDAPIDEFGLLRQPKWGHLRDLHR |
Full Sequence |
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Protein Sequence Length: 717 Download |
MAGAPPLLVS ASGGGRTLLA AFLAASLLAA AANASVLYDH RSLVINGRRR ILISGSIHYP 60 RSTPEMWPGL IQKAKDGGLD VIQTYVFWNG HEPVQGQYHF ADRYDLVRFI KLVKQAGLYV 120 HLRIGPYVCA EWNFGGFPVW LKYVPGIRFR TDNGPFKAAM QKFVEKIVSM MKSEGLFEWQ 180 GGPIIMAQRR PALCNWAAQM AVGTNTGLPW VMCKQDDAPD PVINTCNGFY CDYFTPNKKY 240 KPTMWTEAWT GWFTKFGGAV PHRPVEDLAF AVARFIQKGG SFVNYYMYHG GTNFGRTAGG 300 PFIANSYDYD APIDEFGLLR QPKWGHLRDL HRAIKQAEPV LVSGDPTIQS LGNYEKAHVF 360 KSKNGACAAF LSNYHMNSAV KVRFNGRHYD LPAWSISILP DCKTAVFNTA TVKEPTLLPK 420 MTPVLQFAWQ SYSEDTNSLD DSAFTKDGLV EQLSLTWDKS DYLWYTTQVN IGANEQFLKS 480 GQWPQLTVYS AGHSMQVFVN GRSYGSVYGS YENPKLTFNG HVKMWQGSNK ISILSSAVGL 540 PNTGNHFESW NVGVLGPVTV SGLNEGKRDL SHQKWTYQVG LKGESLGLHT VTGSSAVEWA 600 GPGGKQPLTW HKALFNAPAG SSPVALDMGS MGKGQVWVNG HHAGRYWSYR AAAGGCGRCS 660 YAGTYREGRC LSGCGDPSQR WYHVPRSWLK PSGNLLVVLE EYGGDLAGVA LATRTT* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.006 | 58 | 154 | 100 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 9.0e-17 | 36 | 142 | 109 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-151 | 42 | 334 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 35 | 716 | 701 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
Swiss-Prot | A2X2H7 | 0 | 33 | 716 | 35 | 729 | BGAL4_ORYSI RecName: Full=Beta-galactosidase 4; Short=Lactase 4; Flags: Precursor |
GenBank | EAZ22260.1 | 0 | 33 | 710 | 35 | 723 | hypothetical protein OsJ_05915 [Oryza sativa Japonica Group] |
RefSeq | NP_001130532.1 | 0 | 33 | 715 | 25 | 721 | hypothetical protein LOC100191631 [Zea mays] |
Swiss-Prot | Q6Z6K4 | 0 | 33 | 716 | 35 | 729 | BGAL4_ORYSJ RecName: Full=Beta-galactosidase 4; Short=Lactase 4; Flags: Precursor |
RefSeq | XP_002453540.1 | 0 | 36 | 716 | 45 | 740 | hypothetical protein SORBIDRAFT_04g007660 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1.99993e-41 | 42 | 330 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4e-37 | 35 | 337 | 10 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4e-37 | 35 | 337 | 10 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 702 | 35 | 715 | 0 |
HO780602 | 657 | 86 | 715 | 0 |
HO795552 | 524 | 126 | 630 | 0 |
HO795552 | 53 | 35 | 87 | 2e-35 |
HO795552 | 51 | 87 | 137 | 2e-35 |
Sequence Alignments (This image is cropped. Click for full image.) |
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