Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si016622m |
Family | GH14 |
Protein Properties | Length: 639 Molecular Weight: 71701.8 Isoelectric Point: 6.6115 |
Chromosome | Chromosome/Scaffold: 1 Start: 8672419 End: 8678661 |
Description | beta-amylase 2 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH14 | 485 | 614 | 1e-32 |
IPSIYWWYRTASHAAELTAGFYNPTNRDGYSPVLKMLKKHSVILKLVCYGPEFTVQENDEACADPEGLTWQVVNAAWDHGLSLCIESALPCLDGDMYSQI LDTTKPRNDPDRHHASFFTYRQQPPSLLQR | |||
GH14 | 223 | 485 | 0 |
ASLPMGIINNHCQLVDPEGVRAELRHLKSLNVDGVVVDCWWGIVEAWIPRKYEWSGYRDLFGIIKEFKLKVQVVLSFHVSGGTGSGDVLISLPKWIIEIA KENQDIFFADREGRRNTECLSWGVDKERVLRGRTGIEVYFDFMRSFHMEFRNLSEEGLISAIEIGLGASGELRYPSCPERMGWKYPGIGEFQCYDRYMQK NLRQSAASRGHLFWARGPDNAGYYNSRPRETGFFCDGGDYDSYYGRFFLNWYSGVLIDHVDQI |
Full Sequence |
---|
Protein Sequence Length: 639 Download |
MKLPHPHPPL VLGEEEPSPP PQRRPRGFAS GPAPSAGAAG PPRRRGERER EREKERTKLR 60 ERHRRAITSR MLAGLRQHGN FPLPARADMN DVLAALARAA GWTVQPDGTT FRSSNPPSLS 120 PPPPSQLGMF QVAPVETPAF ISTLNSYAIG TPLDSQASAL QTDDSLSPSS LDSVVAERSI 180 KTENYGNSSS ANSLNCMDND QLLRSSAVLA GDYTKTPYIP VYASLPMGII NNHCQLVDPE 240 GVRAELRHLK SLNVDGVVVD CWWGIVEAWI PRKYEWSGYR DLFGIIKEFK LKVQVVLSFH 300 VSGGTGSGDV LISLPKWIIE IAKENQDIFF ADREGRRNTE CLSWGVDKER VLRGRTGIEV 360 YFDFMRSFHM EFRNLSEEGL ISAIEIGLGA SGELRYPSCP ERMGWKYPGI GEFQCYDRYM 420 QKNLRQSAAS RGHLFWARGP DNAGYYNSRP RETGFFCDGG DYDSYYGRFF LNWYSGVLID 480 HVDQIPSIYW WYRTASHAAE LTAGFYNPTN RDGYSPVLKM LKKHSVILKL VCYGPEFTVQ 540 ENDEACADPE GLTWQVVNAA WDHGLSLCIE SALPCLDGDM YSQILDTTKP RNDPDRHHAS 600 FFTYRQQPPS LLQRDAYFPE LRTFVKCMHG EAPQNGED* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 5.0e-103 | 219 | 628 | 434 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 6.0e-119 | 219 | 634 | 439 | + beta-amylase | ||
PLN02801 | PLN02801 | 8.0e-141 | 218 | 631 | 437 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 67 | 631 | 586 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 67 | 632 | 598 | + beta-amylase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29216.1 | 0 | 57 | 631 | 19 | 605 | unnamed protein product [Vitis vinifera] |
GenBank | EAY84334.1 | 0 | 89 | 634 | 1 | 561 | hypothetical protein OsI_05709 [Oryza sativa Indica Group] |
GenBank | EAZ21608.1 | 0 | 202 | 629 | 88 | 530 | hypothetical protein OsJ_05236 [Oryza sativa Japonica Group] |
RefSeq | XP_002270680.1 | 0 | 50 | 631 | 70 | 663 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002451472.1 | 0 | 7 | 556 | 3 | 563 | hypothetical protein SORBIDRAFT_04g002450 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdq_A | 0 | 218 | 631 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byd_A | 0 | 218 | 631 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byc_A | 0 | 218 | 631 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1byb_A | 0 | 218 | 631 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1bya_A | 0 | 218 | 631 | 11 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO329361 | 220 | 177 | 396 | 0 |
EB439624 | 285 | 265 | 532 | 0 |
CJ908248 | 223 | 266 | 488 | 0 |
CJ908112 | 221 | 268 | 488 | 0 |
JG649066 | 276 | 263 | 521 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|