| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si016713m |
| Family | GT31 |
| Protein Properties | Length: 595 Molecular Weight: 66815.5 Isoelectric Point: 6.5602 |
| Chromosome | Chromosome/Scaffold: 1 Start: 28665818 End: 28668885 |
| Description | galactosyltransferase1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 432 | 540 | 5.5e-40 |
| VSAKYVMKTDDDAFVRVDEIQSTIKQLNVSNGLLYGRINSYSGPHRNPESKWYISQKEWPEEKYPPWAHGPGYVVSQDIARKINTWYKARHLKMFKLEDV AMGIWVNDL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 595 Download |
| MWMTNKLATT VSITFFSLVI VRYLIVNSPT SGISQYQILH TNPLEWFNSP VAAQETTPEA 60 AAANASTSNS LDFGNISPEV FQWLDTWNQM KQLTNITNGL PHASEAINDG RTAWENLTTS 120 VHNAKSQHRE KERLCPYSIR RMDASKLETD SFTIEVPCGL IVGSSITLIG TPGVLSGNFW 180 IDLVGTALPG ESENPIVLQY NVHLNGDKIT KDPVIVQNTF TGNNGWGVEE RCPSTNSHNA 240 TEVDDLKRCN AMVGREDRDI MNSKHHAAAK KHREPSTYFP FKQGYLAIAT LRVGSEGIHM 300 TVDGKHITSF AYRAGLEPWF ITEVIISGDF KLVSAIASGL PTSEDLENSN VEMLKSPPIP 360 DGKDVDLLIG IFSTANNFKR RMAIRRTWMQ YDAVRQGAVA VRFFVGLHTN LMVNEELWNE 420 ARTYGDIQTT AVSAKYVMKT DDDAFVRVDE IQSTIKQLNV SNGLLYGRIN SYSGPHRNPE 480 SKWYISQKEW PEEKYPPWAH GPGYVVSQDI ARKINTWYKA RHLKMFKLED VAMGIWVNDL 540 KKDGLPVRYE TDTRINAEGC NDGYIVAHYQ EPRDMLCLWE KLLRTHRAGC CNTD* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 7.0e-16 | 157 | 334 | 178 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| pfam00337 | Gal-bind_lectin | 5.0e-19 | 152 | 334 | 183 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| cd00070 | GLECT | 1.0e-19 | 152 | 334 | 183 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam01762 | Galactosyl_T | 4.0e-35 | 379 | 541 | 192 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 0 | 14 | 591 | 622 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD34256.1 | 0 | 1 | 592 | 1 | 621 | putative beta-1,3-galactosyltransferase [Oryza sativa Japonica Group] |
| DDBJ | BAF09134.2 | 0 | 1 | 592 | 30 | 650 | Os02g0577300 [Oryza sativa Japonica Group] |
| GenBank | EAY86411.1 | 0 | 1 | 592 | 1 | 621 | hypothetical protein OsI_07790 [Oryza sativa Indica Group] |
| RefSeq | NP_001047220.1 | 0 | 1 | 592 | 108 | 728 | Os02g0577300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002452334.1 | 0 | 1 | 593 | 1 | 596 | hypothetical protein SORBIDRAFT_04g023900 [Sorghum bicolor] |
