Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si016751m |
Family | GH47 |
Protein Properties | Length: 580 Molecular Weight: 65766.7 Isoelectric Point: 5.7888 |
Chromosome | Chromosome/Scaffold: 1 Start: 37662124 End: 37667508 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 49 | 483 | 0 |
MFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPQDYNGSALTLVESLSSLVVLGNITEFERGILWLSENLTFDVDARINLFECNIRLLGGL ISAHLLAKDYSSQLKDEPYQDQLLHLAESLGNRFLPAFETPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGVLSRLTGDSRYEAAALRALRKLWS MRSSLNLVGTTLDVLTGKWIEYSSGIGAGVDSFYEYLIKAYILFGSDEYWDMFHSAYLAVQKYFRHGPWYHEADMRTGEATHWQLTSLQAFWPGLQTLLG DVAAANLSHREFYNVWQRFGVLPERYLLDYGVLHPTEKYYPLRPEFAESTFYLYQATKDPWYLEVGETIIGSLNYYTKVDGGFASVRDVSTMKLEDHQHS FFLSETCKYLFLLYDDSFLRNQNYIFTTEGHPLPV |
Full Sequence |
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Protein Sequence Length: 580 Download |
MRSPEPCLPA PARLAVVALL LAALIGGAVG VDGYGRARRL HMKNKVLEMF YHAYDNYMTY 60 AFPHDELKPL TKSFTDSLSE LGNLNLEHLP QDYNGSALTL VESLSSLVVL GNITEFERGI 120 LWLSENLTFD VDARINLFEC NIRLLGGLIS AHLLAKDYSS QLKDEPYQDQ LLHLAESLGN 180 RFLPAFETPT GLPYAWINLK YGVMENETTE TSTSGCGSLI LEMGVLSRLT GDSRYEAAAL 240 RALRKLWSMR SSLNLVGTTL DVLTGKWIEY SSGIGAGVDS FYEYLIKAYI LFGSDEYWDM 300 FHSAYLAVQK YFRHGPWYHE ADMRTGEATH WQLTSLQAFW PGLQTLLGDV AAANLSHREF 360 YNVWQRFGVL PERYLLDYGV LHPTEKYYPL RPEFAESTFY LYQATKDPWY LEVGETIIGS 420 LNYYTKVDGG FASVRDVSTM KLEDHQHSFF LSETCKYLFL LYDDSFLRNQ NYIFTTEGHP 480 LPVRSTWHAK FPATHVLSNW TFVKDENQPI RVSALSSQVC PETVFRKSIG SPWESACHVP 540 DVYASHRCRT DDDCGTEAVT CKKRTCSMAG YCSLWLVIY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 5.0e-62 | 44 | 483 | 487 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 1.0e-142 | 49 | 483 | 472 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC73977.1 | 0 | 32 | 579 | 38 | 585 | hypothetical protein OsI_08885 [Oryza sativa Indica Group] |
RefSeq | NP_001048080.1 | 0 | 32 | 579 | 38 | 585 | Os02g0741300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002321565.1 | 0 | 34 | 577 | 28 | 566 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002454305.1 | 0 | 1 | 579 | 1 | 573 | hypothetical protein SORBIDRAFT_04g028330 [Sorghum bicolor] |
RefSeq | XP_002511454.1 | 0 | 31 | 578 | 28 | 575 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 43 | 483 | 21 | 465 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fo3_A | 0 | 43 | 483 | 11 | 456 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fo2_A | 0 | 43 | 483 | 11 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1fmi_A | 0 | 43 | 483 | 11 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1x9d_A | 0 | 43 | 483 | 89 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |