| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si016790m |
| Family | AA7 |
| Protein Properties | Length: 565 Molecular Weight: 61111.6 Isoelectric Point: 7.17 |
| Chromosome | Chromosome/Scaffold: 1 Start: 2077115 End: 2078924 |
| Description | FAD-binding Berberine family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA7 | 80 | 547 | 0 |
| PRTPRPALLLTPATVADARACVACCRRHGLTVRVRSGGHDYEGLSYRSVPPRAAGARPFAVVDVAALGGVRVDAARREARVGPGATLGELYYAVARDSGG SLGFPAGICPTVCVGGHVSGGGFGPMMRKHGLAADNVVDAEVVDAEGRLLDRAAMGEGLFWALRGGGGGSFGVVVSWTVRLVPVPPVVSTFNVRRLLRRG DRRQAESTVRLLTKWQRVAHALPDDLFVKAAIEPKLDAPGERRPLVTFKSLFLGNCSSMVAEMSTHLPELGVTPSDCRDMSWIQSMLYFYGYTDGQPAEV LLDRTLQPKEYYKVKLDYLTSPIPAAGLRGLLARIVEDGGGSIDIDPQGGAMGATPESATPYAHRRGYLYNVQYFVKWHGGAGGEEEEGHLGWVRGVHGF MAPYVSSGPRAAYVNFRDLDLGMNVEGETSYEKARAWGEVYFRGNFRRLAMVKAEVDPEQVFWSEQSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MQPSFAHLCL LLLVFLLVWP CSPQEQEHDG DGALHESFLR CVASLSPATT DPSRLVHAPS 60 EASYPSLLNA TIQNLRFASP RTPRPALLLT PATVADARAC VACCRRHGLT VRVRSGGHDY 120 EGLSYRSVPP RAAGARPFAV VDVAALGGVR VDAARREARV GPGATLGELY YAVARDSGGS 180 LGFPAGICPT VCVGGHVSGG GFGPMMRKHG LAADNVVDAE VVDAEGRLLD RAAMGEGLFW 240 ALRGGGGGSF GVVVSWTVRL VPVPPVVSTF NVRRLLRRGD RRQAESTVRL LTKWQRVAHA 300 LPDDLFVKAA IEPKLDAPGE RRPLVTFKSL FLGNCSSMVA EMSTHLPELG VTPSDCRDMS 360 WIQSMLYFYG YTDGQPAEVL LDRTLQPKEY YKVKLDYLTS PIPAAGLRGL LARIVEDGGG 420 SIDIDPQGGA MGATPESATP YAHRRGYLYN VQYFVKWHGG AGGEEEEGHL GWVRGVHGFM 480 APYVSSGPRA AYVNFRDLDL GMNVEGETSY EKARAWGEVY FRGNFRRLAM VKAEVDPEQV 540 FWSEQSIPPL FVERQSESGL VSDT* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam08031 | BBE | 1.0e-15 | 491 | 548 | 58 | + Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL54298.1 | 0 | 21 | 564 | 28 | 487 | unknown [Zea mays] |
| GenBank | ACN34780.1 | 0 | 21 | 564 | 28 | 561 | unknown [Zea mays] |
| GenBank | EAY85134.1 | 0 | 20 | 564 | 23 | 566 | hypothetical protein OsI_06489 [Oryza sativa Indica Group] |
| RefSeq | NP_001046387.1 | 0 | 16 | 549 | 20 | 553 | Os02g0235900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002451843.1 | 0 | 20 | 542 | 23 | 548 | hypothetical protein SORBIDRAFT_04g008542 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dns_B | 0 | 34 | 551 | 9 | 497 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4dns_A | 0 | 34 | 551 | 9 | 497 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_B | 0 | 33 | 551 | 6 | 497 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_A | 0 | 33 | 551 | 6 | 497 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsh_A | 0 | 33 | 551 | 6 | 497 | A Chain A, Crystal Structure Of Phl P 4, A Grass Pollen Allergen With Glucose Dehydrogenase Activity |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| cannabinoid biosynthesis | RXN-7854 | EC-1.21.3 | tetrahydrocannabinolic acid synthase |
