Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si016909m |
Family | GH9 |
Protein Properties | Length: 523 Molecular Weight: 54781.4 Isoelectric Point: 6.4344 |
Chromosome | Chromosome/Scaffold: 1 Start: 9157657 End: 9159865 |
Description | cellulase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 32 | 514 | 0 |
NYADALDKALLFFEAQRSGRLPPGQRVAWRGDSGLSDGSAEGVDLVGGYYDAGDNVKFGLPMAFTVTMLSWGAVEFGDAMARAGQLENARAAVRWGADYL LKAAAAAPDALYVQVGDPYQDHRCWERPEDMDTPRSIYKVTPDKPGSDVAGETAAALAAASLVFRACDPAYSSKLLQTARKVFDFADRYRGSYSDSLSYV ACPFYCSYSGYHDELLWAAAWLHLATAAGKGGGGAGNSSADTYLSYIYANGHTLGADQDDFTFSWDDKRVGTKVLLAKGFLQPHAAGDKPAAAAAGLKLY KAHADSYVCSLVPGAAGFQPSQYTPGGLLFKEGDSNMQYVTSTTFLLLAYAKYLSTAGASVSCGGGGGAVPPSALVAVARRQVDYILGANPAATSYMVGF GARFPRRVHHRGASMPSVRDHPARIGCDEGFRYLHAAEPDANVLVGAVVGGPDGGDAYTDSRDNYAQAEPSTYTNAPLVGALA |
Full Sequence |
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Protein Sequence Length: 523 Download |
MAAVSATNKA AVFLAVAVIC LLAGSNAVAA FNYADALDKA LLFFEAQRSG RLPPGQRVAW 60 RGDSGLSDGS AEGVDLVGGY YDAGDNVKFG LPMAFTVTML SWGAVEFGDA MARAGQLENA 120 RAAVRWGADY LLKAAAAAPD ALYVQVGDPY QDHRCWERPE DMDTPRSIYK VTPDKPGSDV 180 AGETAAALAA ASLVFRACDP AYSSKLLQTA RKVFDFADRY RGSYSDSLSY VACPFYCSYS 240 GYHDELLWAA AWLHLATAAG KGGGGAGNSS ADTYLSYIYA NGHTLGADQD DFTFSWDDKR 300 VGTKVLLAKG FLQPHAAGDK PAAAAAGLKL YKAHADSYVC SLVPGAAGFQ PSQYTPGGLL 360 FKEGDSNMQY VTSTTFLLLA YAKYLSTAGA SVSCGGGGGA VPPSALVAVA RRQVDYILGA 420 NPAATSYMVG FGARFPRRVH HRGASMPSVR DHPARIGCDE GFRYLHAAEP DANVLVGAVV 480 GGPDGGDAYT DSRDNYAQAE PSTYTNAPLV GALAFLAGGR RH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03009 | PLN03009 | 4.0e-149 | 32 | 517 | 488 | + cellulase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-153 | 32 | 514 | 485 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 8.0e-154 | 12 | 518 | 510 | + endoglucanase | ||
PLN02308 | PLN02308 | 1.0e-162 | 10 | 517 | 510 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 28 | 517 | 490 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ05384.1 | 0 | 30 | 518 | 33 | 501 | hypothetical protein OsI_27591 [Oryza sativa Indica Group] |
GenBank | EAZ21561.1 | 0 | 8 | 521 | 2 | 484 | hypothetical protein OsJ_05189 [Oryza sativa Japonica Group] |
RefSeq | NP_001045737.1 | 0 | 8 | 521 | 2 | 499 | Os02g0123700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060848.1 | 0 | 30 | 518 | 52 | 520 | Os08g0114200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002451429.1 | 0 | 11 | 521 | 17 | 513 | hypothetical protein SORBIDRAFT_04g001960 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4tf4_B | 0 | 30 | 517 | 3 | 441 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 4tf4_A | 0 | 30 | 517 | 3 | 441 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3tf4_B | 0 | 30 | 517 | 3 | 441 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3tf4_A | 0 | 30 | 517 | 3 | 441 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 1tf4_B | 0 | 30 | 517 | 3 | 441 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |