| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si017029m |
| Family | CBM43 |
| Protein Properties | Length: 491 Molecular Weight: 53174.6 Isoelectric Point: 5.2367 |
| Chromosome | Chromosome/Scaffold: 1 Start: 8122802 End: 8127839 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 370 | 451 | 1.3e-25 |
| WCVLKPSVSLTEPRLADNVAYACSMADCTSLGYKTSCGMLDVRGNISYAFNNYYQKNDQDDVACGFQNLATTTGQDPSTGTC | |||
| GH17 | 31 | 348 | 0 |
| IGANWGTQTSHPLPPDTVVRMLKDNGFQKVKLFDAEDGTMNALKKSGLEVMVGIPNDMLLTMATNMKAAEKWVDTNVSSYLNDGVSVRYVAVGNEPFLET YNGSFLQTTYPAIKNIQSALIKAGLGNQVKVTCPLNADVYASPTSKPSDGDFRTDIHDLMIAIVKLLSDNGGAFTVNIYPFISLYIDPNFPVDYAFFEGA STPIVDGSITYTNMFDANHDTLIWALKKNGFGNLPVIVGEIGWPTDGDRNANAQMAQRFNQGFMTHIASGRGTPMRPGPVDAYLFSLIDEDEKSIQPGNF ERHWGIFTYDGQPKYQLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 491 Download |
| MGSGSGHGAA AAAAVVLVSW LCAAVVGVGA IGANWGTQTS HPLPPDTVVR MLKDNGFQKV 60 KLFDAEDGTM NALKKSGLEV MVGIPNDMLL TMATNMKAAE KWVDTNVSSY LNDGVSVRYV 120 AVGNEPFLET YNGSFLQTTY PAIKNIQSAL IKAGLGNQVK VTCPLNADVY ASPTSKPSDG 180 DFRTDIHDLM IAIVKLLSDN GGAFTVNIYP FISLYIDPNF PVDYAFFEGA STPIVDGSIT 240 YTNMFDANHD TLIWALKKNG FGNLPVIVGE IGWPTDGDRN ANAQMAQRFN QGFMTHIASG 300 RGTPMRPGPV DAYLFSLIDE DEKSIQPGNF ERHWGIFTYD GQPKYQLNLG TANSGGLVRA 360 RGVKYLEKKW CVLKPSVSLT EPRLADNVAY ACSMADCTSL GYKTSCGMLD VRGNISYAFN 420 NYYQKNDQDD VACGFQNLAT TTGQDPSTGT CRFGIMIEVD SAFSWRLQRL GSNFLLMLLL 480 VLLQLCLSFL * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-6 | 262 | 340 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-16 | 369 | 440 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-29 | 369 | 453 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-72 | 34 | 348 | 317 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38945.1 | 0 | 12 | 458 | 5 | 452 | unnamed protein product [Vitis vinifera] |
| GenBank | EAY84415.1 | 0 | 30 | 473 | 34 | 475 | hypothetical protein OsI_05789 [Oryza sativa Indica Group] |
| RefSeq | NP_001045844.1 | 0 | 7 | 473 | 8 | 472 | Os02g0139300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151032.1 | 0 | 34 | 468 | 36 | 471 | glucan endo-1,3-beta-glucosidase 6 [Zea mays] |
| RefSeq | XP_002530371.1 | 0 | 18 | 458 | 10 | 451 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 31 | 349 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 31 | 349 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 31 | 349 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 31 | 349 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 0 | 31 | 349 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
