Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si017035m |
Family | CBM43 |
Protein Properties | Length: 490 Molecular Weight: 50786.5 Isoelectric Point: 8.2213 |
Chromosome | Chromosome/Scaffold: 1 Start: 39317728 End: 39320671 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 401 | 483 | 3.9e-31 |
WCVANAAVGEQRLLAALNYACGEGGANCKDIQPGAACFEPNTMVAHASYAFNDYFQRKGRTIGTCDFAGAAYVVNQAPKMGKC | |||
GH17 | 31 | 352 | 0 |
VGVNYGRVANNLPNPSAVVQLLKQQGITQVKLYDTDPTVLRALANTGVKVVVALPNEQVAAAASRASYALLWVRRNVAAYYPATQIQGIAVGNEVFATAK NVTAQLVPAMVNVHAALARLGLDKAVKVSSPVALTALANSYPSSAGVFREDLAQPVMKPMLDFLAQTGSYLMVNAYPFFAYSANAGDISLDYALFRPNAG VQDAGNGLKYYSLLDAQLDAVFAAVNRLGNYNGVRVVVSETGWPSKGDASEVGASPANAAAYNGNLARRVLSGNAGTPLRPNADMDVYLFALFNENQKPG PTSERNYGVFYPNQQKVYDVEF |
Full Sequence |
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Protein Sequence Length: 490 Download |
MALPRRALLV AGLLAAALPL LLVCPAEAGT VGVNYGRVAN NLPNPSAVVQ LLKQQGITQV 60 KLYDTDPTVL RALANTGVKV VVALPNEQVA AAASRASYAL LWVRRNVAAY YPATQIQGIA 120 VGNEVFATAK NVTAQLVPAM VNVHAALARL GLDKAVKVSS PVALTALANS YPSSAGVFRE 180 DLAQPVMKPM LDFLAQTGSY LMVNAYPFFA YSANAGDISL DYALFRPNAG VQDAGNGLKY 240 YSLLDAQLDA VFAAVNRLGN YNGVRVVVSE TGWPSKGDAS EVGASPANAA AYNGNLARRV 300 LSGNAGTPLR PNADMDVYLF ALFNENQKPG PTSERNYGVF YPNQQKVYDV EFVLGAGGAA 360 GGGSQGNGGL GWQENGGPSS GSGSTSGNPP SGVKVTTGEA WCVANAAVGE QRLLAALNYA 420 CGEGGANCKD IQPGAACFEP NTMVAHASYA FNDYFQRKGR TIGTCDFAGA AYVVNQAPKM 480 GKCDLPSTV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-8 | 50 | 343 | 302 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-19 | 401 | 472 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-34 | 401 | 483 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-104 | 31 | 352 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF79018.1 | 0 | 25 | 489 | 23 | 481 | unknown [Zea mays] |
GenBank | ACF88240.1 | 0 | 21 | 489 | 19 | 481 | unknown [Zea mays] |
RefSeq | NP_001048260.1 | 0 | 1 | 489 | 1 | 488 | Os02g0771700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001136613.1 | 0 | 21 | 489 | 19 | 481 | hypothetical protein LOC100216736 [Zea mays] |
RefSeq | XP_002454630.1 | 0 | 6 | 489 | 5 | 491 | hypothetical protein SORBIDRAFT_04g034530 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 31 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 31 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 31 | 352 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 31 | 352 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |