Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si017121m |
Family | GH17 |
Protein Properties | Length: 468 Molecular Weight: 51652.4 Isoelectric Point: 9.3491 |
Chromosome | Chromosome/Scaffold: 1 Start: 4526515 End: 4528913 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 106 | 417 | 0 |
GINYGRIADNLPAPEDVVRLLKLARIRNVKIYDADHKVLDAFRGSGLNLVVAIPNEFLKDMAANPSKAMDWLNENVQPYHPSTRIVGITVGNEVLGGGDT GLAEALVGAVANVHDALKMLRLDRDIELTTPHSEAVFSNSYPPSACVFREDLMVYLRPLLDFFSRTGAPFYVNAYPFLAYMSDPSHIDINYALFKPNSGI VDPKTNLHYDNMFEAQLDAAYFALEAAGYPGMEVRVAETGWASAGDATEAGASMVNAVTYNRNLRKRLFLRKGTPYRPDRVAKAYIFALFNEDLKPGPTT ERHYGLFKPDGS |
Full Sequence |
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Protein Sequence Length: 468 Download |
MPRAPRNVPR TPPACSNARP PRCRHTFLLR SRLPPPLLAP SSSPRHHRET AVMSSPRWKS 60 GDGRRRLLLL LCCCLLAFPC CHAQATTTNI SHRSDHDSRS FVGTYGINYG RIADNLPAPE 120 DVVRLLKLAR IRNVKIYDAD HKVLDAFRGS GLNLVVAIPN EFLKDMAANP SKAMDWLNEN 180 VQPYHPSTRI VGITVGNEVL GGGDTGLAEA LVGAVANVHD ALKMLRLDRD IELTTPHSEA 240 VFSNSYPPSA CVFREDLMVY LRPLLDFFSR TGAPFYVNAY PFLAYMSDPS HIDINYALFK 300 PNSGIVDPKT NLHYDNMFEA QLDAAYFALE AAGYPGMEVR VAETGWASAG DATEAGASMV 360 NAVTYNRNLR KRLFLRKGTP YRPDRVAKAY IFALFNEDLK PGPTTERHYG LFKPDGSVSI 420 NIGLKGLVPS SAPPSPLFFK RVRAWGWIVQ YSAALLPCTL IFLALAT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 2.0e-94 | 106 | 417 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN32059.1 | 0 | 53 | 465 | 1 | 415 | unknown [Zea mays] |
DDBJ | BAD15845.1 | 0 | 100 | 466 | 54 | 424 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
GenBank | EEC72694.1 | 0 | 100 | 466 | 54 | 424 | hypothetical protein OsI_06270 [Oryza sativa Indica Group] |
GenBank | EEE56513.1 | 0 | 100 | 466 | 54 | 424 | hypothetical protein OsJ_05789 [Oryza sativa Japonica Group] |
RefSeq | XP_002453496.1 | 0 | 53 | 467 | 1 | 403 | hypothetical protein SORBIDRAFT_04g006850 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 106 | 415 | 2 | 303 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 106 | 422 | 2 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 106 | 422 | 2 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 106 | 424 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 106 | 424 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |