Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si019127m |
Family | CE8 |
Protein Properties | Length: 579 Molecular Weight: 60920.1 Isoelectric Point: 8.4306 |
Chromosome | Chromosome/Scaffold: 1 Start: 11786460 End: 11788783 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 246 | 560 | 0 |
DIVVAKDGTGTHATITDAVKAAPECSERRTVILVKAGRYEENVKVGMRKTNLVFVGDGKGVTVVAGTRSVADRNYTTFRTATFAASGFGFMMRDMTVENA SGPARHQAVALRVSADRAVVHRCAVAGYQDTLYAHSNRQFYRDCDVYGTVDAVFGNAAAVLQRCTLWARAPLSSQKNTVTAQNRNESCQRTGIVLHACRL LPAPDLLAAPSPSPALSPSPAPAQEQEQRAATYLGRPWRPYSRVVVMMSYIGAHVAPRGWLEWNASAYALDTLYYGEYMNYGPGAGVAGRVRWPGHRVIN DTEEAERFTVARFIA |
Full Sequence |
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Protein Sequence Length: 579 Download |
MDHRRAGSPL LLLALLLPSC FLVALLLAGC GSVAHAAPRP VFAFPAAAKV QASSRSHPRH 60 ERLRVALDAA AARVGQALAA MVAAAAVDPA SSDDAPASTR TPLAAAARED CAELLEEALA 120 LLAGAGAAAR DDALTWLSAA LTNHDTCADG LAEAGAVAPG CGAPHHAHAH LAAARAAVRD 180 SLAMYDASTA VDTAATRTAR PGTTEDGCHC NNETRREGVC GFPRWLPARD RRLLLTPAAS 240 LAASADIVVA KDGTGTHATI TDAVKAAPEC SERRTVILVK AGRYEENVKV GMRKTNLVFV 300 GDGKGVTVVA GTRSVADRNY TTFRTATFAA SGFGFMMRDM TVENASGPAR HQAVALRVSA 360 DRAVVHRCAV AGYQDTLYAH SNRQFYRDCD VYGTVDAVFG NAAAVLQRCT LWARAPLSSQ 420 KNTVTAQNRN ESCQRTGIVL HACRLLPAPD LLAAPSPSPA LSPSPAPAQE QEQRAATYLG 480 RPWRPYSRVV VMMSYIGAHV APRGWLEWNA SAYALDTLYY GEYMNYGPGA GVAGRVRWPG 540 HRVINDTEEA ERFTVARFIA GASWLPATGV SFVPGLSL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02170 | PLN02170 | 2.0e-126 | 135 | 576 | 445 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 2.0e-132 | 135 | 576 | 442 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-138 | 135 | 576 | 442 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-163 | 246 | 561 | 316 | + Pectinesterase. | ||
PLN02484 | PLN02484 | 4.0e-169 | 135 | 578 | 448 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABJ99595.1 | 0 | 104 | 578 | 126 | 580 | pectinesterase inhibitor [Lycoris aurea] |
GenBank | EAY85410.1 | 0 | 10 | 578 | 9 | 553 | hypothetical protein OsI_06789 [Oryza sativa Indica Group] |
GenBank | EAZ22625.1 | 0 | 108 | 578 | 20 | 479 | hypothetical protein OsJ_06296 [Oryza sativa Japonica Group] |
RefSeq | NP_001046581.1 | 0 | 10 | 578 | 9 | 554 | Os02g0288100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002453720.1 | 0 | 73 | 578 | 81 | 562 | hypothetical protein SORBIDRAFT_04g011210 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 245 | 576 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 246 | 576 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 7e-19 | 242 | 566 | 1 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 7e-19 | 242 | 566 | 1 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 9e-19 | 242 | 566 | 1 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |