Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si019555m |
Family | CE8 |
Protein Properties | Length: 561 Molecular Weight: 58397.9 Isoelectric Point: 9.6211 |
Chromosome | Chromosome/Scaffold: 1 Start: 39895602 End: 39897810 |
Description | pectin methylesterase 61 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 241 | 544 | 0 |
AVVALDGSGTHRSINEAIAAVTSPVDTEAGGGREAGRARRKVIKVKAGRYKESVSISYQQENVMLVGEGKGKTIIDGNKSVAGGYTTYSSATFAAMGAGF IAKGVSFVNSAGPGKGQAVALLVGGDRSVVYQCEIKAFQDTLFTHSNRQFYAESDISGTVDFVFGNSAAVFQSCELQARKPIPGQQDVVTAQGRVDPNQN TGISIHRCRITAASDLGNTPVYLGRPWKQYSRVVVMETTMDGSVAPDGWLAWPDQPTPSTTLYYGEYRNSGAGAGTKGRVTWTGVHTSMSTADATGFTVA KFIM |
Full Sequence |
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Protein Sequence Length: 561 Download |
METFGGATSP ERQAKMRLPV VAWSCAMATV LALGTVVPVA EARKGDDNVA AVSRICRSTP 60 YPSACETALT SAEARRARDP FAASVQFAMA RARTARSLAR NLSASAPPTA MHDCAELLDI 120 SLAQLRDALA GRAADAAGAT TWLSAALTNQ GTCNDSLAAA ATPKALAAGR GAVRKQVAAL 180 AQFISTALAL HVKRVKGGRG VPPSAATAAP SPKSSTFPSW LSEHDRKLLE SPATDVITAD 240 AVVALDGSGT HRSINEAIAA VTSPVDTEAG GGREAGRARR KVIKVKAGRY KESVSISYQQ 300 ENVMLVGEGK GKTIIDGNKS VAGGYTTYSS ATFAAMGAGF IAKGVSFVNS AGPGKGQAVA 360 LLVGGDRSVV YQCEIKAFQD TLFTHSNRQF YAESDISGTV DFVFGNSAAV FQSCELQARK 420 PIPGQQDVVT AQGRVDPNQN TGISIHRCRI TAASDLGNTP VYLGRPWKQY SRVVVMETTM 480 DGSVAPDGWL AWPDQPTPST TLYYGEYRNS GAGAGTKGRV TWTGVHTSMS TADATGFTVA 540 KFIMGDSWLG ATGVRYTSGL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 5.0e-118 | 226 | 560 | 340 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 6.0e-124 | 2 | 560 | 589 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 3.0e-127 | 220 | 560 | 345 | + pectinesterase/pectinesterase inhibitor | ||
PLN02170 | PLN02170 | 7.0e-139 | 57 | 560 | 513 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-151 | 246 | 546 | 305 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD19539.1 | 0 | 1 | 560 | 1 | 571 | putative pectinesterase [Oryza sativa Japonica Group] |
RefSeq | NP_001048322.1 | 0 | 1 | 560 | 11 | 581 | Os02g0783000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148248.1 | 0 | 52 | 560 | 73 | 578 | pectinesterase-2 [Zea mays] |
RefSeq | XP_002449226.1 | 0 | 27 | 545 | 1 | 569 | hypothetical protein SORBIDRAFT_05g006610 [Sorghum bicolor] |
RefSeq | XP_002454668.1 | 0 | 1 | 560 | 1 | 575 | hypothetical protein SORBIDRAFT_04g035200 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 240 | 560 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 237 | 560 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 1e-16 | 282 | 514 | 36 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-16 | 282 | 514 | 36 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-16 | 282 | 514 | 36 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |