Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si019806m |
Family | GH17 |
Protein Properties | Length: 350 Molecular Weight: 37641.1 Isoelectric Point: 7.1914 |
Chromosome | Chromosome/Scaffold: 1 Start: 26054517 End: 26056476 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 16 | 333 | 0 |
IGVNYGQIANNLPSPARVSWLLRSMRISKVKLYDADPNVLRAFLGTGVEFVVGIGNEAVPSMTSPAAAQAWLQQHVVPHLLSGARISCVTVGNEVFKGND TALQAAVLPAMVSVHRALSALGLQGRVNVTTAHSLDIMGPSFPPSSGAFHPAALGHLRPFLAFLSATRSPFLINCYPYFAYKEDPARVPLEYVLFQPNAG VADPRTGLRYDNMLYAQVDAVYAAIQALGYTDVEVKVSETGWPSRGDPDEPGATPEYAGTYIRNLLQRIEMKQGTPLRPATPVDVYVFALFNENLKPGPA SERNYGLFYPDGTPVYNV |
Full Sequence |
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Protein Sequence Length: 350 Download |
MAPACQGVAV AEALSIGVNY GQIANNLPSP ARVSWLLRSM RISKVKLYDA DPNVLRAFLG 60 TGVEFVVGIG NEAVPSMTSP AAAQAWLQQH VVPHLLSGAR ISCVTVGNEV FKGNDTALQA 120 AVLPAMVSVH RALSALGLQG RVNVTTAHSL DIMGPSFPPS SGAFHPAALG HLRPFLAFLS 180 ATRSPFLINC YPYFAYKEDP ARVPLEYVLF QPNAGVADPR TGLRYDNMLY AQVDAVYAAI 240 QALGYTDVEV KVSETGWPSR GDPDEPGATP EYAGTYIRNL LQRIEMKQGT PLRPATPVDV 300 YVFALFNENL KPGPASERNY GLFYPDGTPV YNVGLHGYLP PMLVSNAARQ |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 43 | 326 | 295 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-99 | 16 | 333 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH67163.1 | 0 | 9 | 350 | 35 | 375 | H0717B12.10 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY86149.1 | 0 | 10 | 350 | 33 | 373 | hypothetical protein OsI_07522 [Oryza sativa Indica Group] |
RefSeq | NP_001047027.1 | 0 | 10 | 350 | 33 | 373 | Os02g0532900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001052739.1 | 0 | 9 | 350 | 35 | 375 | Os04g0412300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002452203.1 | 0 | 6 | 350 | 41 | 391 | hypothetical protein SORBIDRAFT_04g021700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 16 | 335 | 2 | 315 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 3f55_C | 0 | 16 | 335 | 2 | 315 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 3f55_B | 0 | 16 | 335 | 2 | 315 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 3f55_A | 0 | 16 | 335 | 2 | 315 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 3em5_D | 0 | 16 | 335 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO825834 | 328 | 13 | 339 | 0 |
HO810153 | 328 | 13 | 339 | 0 |
FL917710 | 218 | 16 | 232 | 0 |
FL859291 | 232 | 8 | 238 | 0 |
FL917710 | 35 | 233 | 267 | 1.3 |
Sequence Alignments (This image is cropped. Click for full image.) |
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