| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si019968m |
| Family | CE8 |
| Protein Properties | Length: 239 Molecular Weight: 26220.3 Isoelectric Point: 6.1571 |
| Chromosome | Chromosome/Scaffold: 1 Start: 41670006 End: 41670737 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 4 | 202 | 0 |
| RNAAGLEGNQAVALRSNSNKSVVYRCRVEGYKDTLYAENGLQFYVESNITGTVDFVFGNAKAVFHKCRIQVRRPLEQKHNVVTAQGRYNATTTDSGFCVV EAEPGHDLNGVDTFLGRPYKNYSHVAFVNSFIGEVVNATGWVPWKRDHEIKETTMTVEYYEYGNQGPGADTARRVNWEGLHILKDAAEAAKFTPDRFID | |||
| Full Sequence |
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| Protein Sequence Length: 239 Download |
| PDDRNAAGLE GNQAVALRSN SNKSVVYRCR VEGYKDTLYA ENGLQFYVES NITGTVDFVF 60 GNAKAVFHKC RIQVRRPLEQ KHNVVTAQGR YNATTTDSGF CVVEAEPGHD LNGVDTFLGR 120 PYKNYSHVAF VNSFIGEVVN ATGWVPWKRD HEIKETTMTV EYYEYGNQGP GADTARRVNW 180 EGLHILKDAA EAAKFTPDRF IDANLWVPEQ IQYDHGLGAP PLMPGGVAPP LMPGGGAA* 240 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 3.0e-59 | 4 | 209 | 209 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 3.0e-60 | 4 | 208 | 211 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02488 | PLN02488 | 4.0e-62 | 4 | 209 | 213 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 5.0e-63 | 4 | 207 | 211 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 5.0e-79 | 4 | 204 | 207 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA94334.1 | 0 | 4 | 217 | 155 | 370 | Pectinesterase family protein [Oryza sativa (japonica cultivar-group)] |
| DDBJ | BAH95129.1 | 0 | 5 | 217 | 29 | 249 | Os11g0194200 [Oryza sativa Japonica Group] |
| GenBank | EAY80256.1 | 0 | 5 | 217 | 162 | 382 | hypothetical protein OsI_35428 [Oryza sativa Indica Group] |
| GenBank | EAY81365.1 | 0 | 4 | 217 | 155 | 370 | hypothetical protein OsI_36536 [Oryza sativa Indica Group] |
| RefSeq | XP_002453066.1 | 0 | 5 | 215 | 145 | 372 | hypothetical protein SORBIDRAFT_04g037740 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 4 | 217 | 100 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 1.4013e-45 | 4 | 207 | 104 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 0.00000000004 | 3 | 172 | 145 | 335 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.00000001 | 3 | 86 | 119 | 204 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.00000001 | 3 | 86 | 119 | 204 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY948282 | 208 | 4 | 209 | 0 |
| DY946604 | 208 | 4 | 209 | 0 |
| CF808553 | 209 | 4 | 207 | 0 |
| DY389562 | 208 | 5 | 208 | 0 |
| DY389561 | 208 | 5 | 208 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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