Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si020199m |
Family | GH3 |
Protein Properties | Length: 631 Molecular Weight: 68317.7 Isoelectric Point: 7.2797 |
Chromosome | Chromosome/Scaffold: 1 Start: 8576861 End: 8581981 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 105 | 339 | 0 |
LSTRLGIPMLYGIDAVHGHGNVYKATIFPHNVGLGCTRDPELAKRIGAAVALEVRATGIPYIFAPCVAVCRDPRWGRCYESFSEHPELVQNMTSIISGFQ GEIPAGGTLGVPFMAGQRNVAACSKHYVGDGGTTNGINENNTVATFHELLSIHMPPYYNAVIRGVSTVMISYSSWNGLKMHANRFLITDFLKKELRFRGF VISDWQGLDRITTPEHADYILSIKLGILAGIDMVM |
Full Sequence |
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Protein Sequence Length: 631 Download |
MTTAAAFLLL LQLFGCVAPL PMKSADRYKD PSQPLNTRID DLLGRMTLAE KIGQMSQIER 60 EKATPDVINK YFIGSVLSGG GSVPEKNAPP EAWVGMVNGM QSGALSTRLG IPMLYGIDAV 120 HGHGNVYKAT IFPHNVGLGC TRDPELAKRI GAAVALEVRA TGIPYIFAPC VAVCRDPRWG 180 RCYESFSEHP ELVQNMTSII SGFQGEIPAG GTLGVPFMAG QRNVAACSKH YVGDGGTTNG 240 INENNTVATF HELLSIHMPP YYNAVIRGVS TVMISYSSWN GLKMHANRFL ITDFLKKELR 300 FRGFVISDWQ GLDRITTPEH ADYILSIKLG ILAGIDMVMI PFNYTEFIDG LTLLVNNGTI 360 PMSRIDDAVR RILRVKFTMG LFENPYADPS LTGELGKQEH RDLAREAVRK SLVLLKNGKP 420 GDKPLLPLPK KAYGGILVAG SHANDLGSQC GGWTITWQGL TGNNLTAGTT ILDGIKRAVV 480 PGTDVVYSEN PDAGFIQQNK ARFDYAIVVV GEPPYAETFG DNLNLTIPAP GPAIIQNVCG 540 SIKCVVVIVS GRPLVLEPYI NTMNALVAAW LPGTEGQGVA DVLFGDYGFT GKLSRTWFRS 600 VNQLPMNVGD ARYDPLFPFG FGLETQPSTY * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 3.0e-31 | 21 | 630 | 672 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-42 | 436 | 623 | 204 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 5.0e-67 | 46 | 456 | 421 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 2.0e-76 | 16 | 623 | 692 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 7.0e-87 | 47 | 375 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF07705.2 | 0 | 27 | 628 | 16 | 619 | Os02g0131400 [Oryza sativa Japonica Group] |
RefSeq | NP_001045791.1 | 0 | 27 | 628 | 44 | 647 | Os02g0131400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130296.1 | 0 | 11 | 626 | 10 | 619 | exoglucanase1 [Zea mays] |
RefSeq | XP_002451476.1 | 0 | 27 | 630 | 56 | 662 | hypothetical protein SORBIDRAFT_04g002570 [Sorghum bicolor] |
RefSeq | XP_002453253.1 | 0 | 13 | 630 | 25 | 658 | hypothetical protein SORBIDRAFT_04g002560 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 28 | 628 | 5 | 602 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1iex_A | 0 | 28 | 628 | 5 | 602 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1iew_A | 0 | 28 | 628 | 5 | 602 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1iev_A | 0 | 28 | 628 | 5 | 602 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ieq_A | 0 | 28 | 628 | 5 | 602 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |