| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si021403m |
| Family | GH35 |
| Protein Properties | Length: 667 Molecular Weight: 75088.7 Isoelectric Point: 6.6125 |
| Chromosome | Chromosome/Scaffold: 3 Start: 12010602 End: 12018004 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 41 | 365 | 0 |
| FMKDGAPFQIVGGDVHYFRIVPEYWKDRLLRAKALGLNAIQTYVPWNLHEPEPQSWEFKGFADIESYLRLAQELDMLVMLRVGPYICGEWDLGGFPPWLL AIEPALKLRSSDSTYLSLVERWWGVLLPKVAPLLYNNGGPVIMVQIENEFGSFGDDKNYLHYLVQLARRYLGNNIVLYTTDGGAIGNLKNGSIPQDDVFA AVDFGTGSNPWPIFRLQKKYNLPGKSAPLSSEFYTGWLTHWGESIATTDAASTAKALKTILCHNGSAVLYMAHGGTNFGFYNGANTGQDESDYKADLTSY DYDAPIKEHGDVHNSKYEALRRVIH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 667 Download |
| MASSGTFQNL LLAPLLCLAL ASSVGGEASS SRRFWIENDT FMKDGAPFQI VGGDVHYFRI 60 VPEYWKDRLL RAKALGLNAI QTYVPWNLHE PEPQSWEFKG FADIESYLRL AQELDMLVML 120 RVGPYICGEW DLGGFPPWLL AIEPALKLRS SDSTYLSLVE RWWGVLLPKV APLLYNNGGP 180 VIMVQIENEF GSFGDDKNYL HYLVQLARRY LGNNIVLYTT DGGAIGNLKN GSIPQDDVFA 240 AVDFGTGSNP WPIFRLQKKY NLPGKSAPLS SEFYTGWLTH WGESIATTDA ASTAKALKTI 300 LCHNGSAVLY MAHGGTNFGF YNGANTGQDE SDYKADLTSY DYDAPIKEHG DVHNSKYEAL 360 RRVIHKCTRT PLHPLPSDIE KANYGLVKLQ KVASLFDIID NISDPLKGAV SEHPLYMEQI 420 GQMFGFLLYM SEYQGKLPSS ILSIPKVHDR AQVFLSCSTD GIRNPRYAGI IERWSSKTLE 480 IPNLRCSSNT SLYILVENMG RVNYGPYIFD RKGILSPIQI DGITLRHWKM YPLTFSSLDN 540 LPKLQLITQM PDVRDSKVSI IHGDSEKKLQ ESSFYSNEPE FYEGHFHIDS ESEIKDTFIS 600 FRGWNKGVAF VNNFNIGRFW PAWGPQCALY VPAPILRPGD NTIVCTLFLL WRYAFFFPAF 660 SVCFSK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 0.0003 | 581 | 653 | 75 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| pfam02449 | Glyco_hydro_42 | 0.0001 | 63 | 191 | 146 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 2.0e-27 | 39 | 644 | 646 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 3.0e-40 | 50 | 369 | 328 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-145 | 40 | 366 | 328 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAV59405.1 | 0 | 1 | 644 | 1 | 636 | putative beta-galactosidase [Oryza sativa Japonica Group] |
| GenBank | ACR37865.1 | 0 | 1 | 644 | 1 | 645 | unknown [Zea mays] |
| RefSeq | NP_001056172.1 | 0 | 1 | 644 | 1 | 648 | Os05g0539400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002327549.1 | 0 | 32 | 644 | 1 | 610 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002441448.1 | 0 | 1 | 644 | 1 | 581 | hypothetical protein SORBIDRAFT_09g026870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 29 | 651 | 4 | 600 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_C | 0 | 29 | 651 | 4 | 600 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_B | 0 | 29 | 651 | 4 | 600 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_A | 0 | 29 | 651 | 4 | 600 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thc_D | 0 | 29 | 651 | 4 | 600 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
