Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si021445m |
Family | GH47 |
Protein Properties | Length: 643 Molecular Weight: 71890.9 Isoelectric Point: 7.3406 |
Chromosome | Chromosome/Scaffold: 3 Start: 4749615 End: 4753225 |
Description | alpha-mannosidase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 141 | 631 | 0 |
AFEHAWSGYRNYAMGYDELMPLSHRGTDGLGGLGATIVDSLDTAIIMGADDVVSEASKWIEENLMKRISEKGQVNLFETTIRVLGGLLSAYHLSGGDHAG SGDSRIPASYKKANPERLLEVSKDLADRLLLAFTSSPTAIPLSDVILRDRTAHAAPDGLSSTSEASTLQLEFSYLSKVSGDPKYDREAMKVLEHMRTLPK VEGLVPIYINPSSGQFSGENIRLGSRGDSYYEYLLKVWIQQEENRDTSLKYLFEMYTEAMRGVKHLLVRKTVPNELVFVGELPFGRNGDFSPKMDHLVCF LPGTLALGATKGITKKKALESNLLTDEDIENLQLAEDLAKTCVEMYFVTSTGLAPEIAYFHIEGNPEGGPDGGNKSNKYVNDIIIKPLDRHNLLRPETVE SLFVLHRITEDPKYREWGWQIFQAFEKYTKVDSGGYSSLDDVTSLPPHRRDKMETFFLGETLKYLYLLFDESNTLPLDKYVFNTEAHPLPV |
Full Sequence |
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Protein Sequence Length: 643 Download |
MSGGSGPLPY SMRDVGAGGA YNNAKFRHRS RLKMLVQSLA TNSSKYRCGK FTVGKFLSLL 60 MVSGLLYLFL HKSPEGFVSG DLHGKEMHNN NVKRAPNIRT LWRKPPRLPP RLPPNEIYKN 120 NSLLQQSPSE WTSRQKKVKE AFEHAWSGYR NYAMGYDELM PLSHRGTDGL GGLGATIVDS 180 LDTAIIMGAD DVVSEASKWI EENLMKRISE KGQVNLFETT IRVLGGLLSA YHLSGGDHAG 240 SGDSRIPASY KKANPERLLE VSKDLADRLL LAFTSSPTAI PLSDVILRDR TAHAAPDGLS 300 STSEASTLQL EFSYLSKVSG DPKYDREAMK VLEHMRTLPK VEGLVPIYIN PSSGQFSGEN 360 IRLGSRGDSY YEYLLKVWIQ QEENRDTSLK YLFEMYTEAM RGVKHLLVRK TVPNELVFVG 420 ELPFGRNGDF SPKMDHLVCF LPGTLALGAT KGITKKKALE SNLLTDEDIE NLQLAEDLAK 480 TCVEMYFVTS TGLAPEIAYF HIEGNPEGGP DGGNKSNKYV NDIIIKPLDR HNLLRPETVE 540 SLFVLHRITE DPKYREWGWQ IFQAFEKYTK VDSGGYSSLD DVTSLPPHRR DKMETFFLGE 600 TLKYLYLLFD ESNTLPLDKY VFNTEAHPLP VMRSAEQASH SV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 1.0e-168 | 133 | 631 | 502 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 0 | 141 | 631 | 494 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAT01383.1 | 0 | 27 | 642 | 86 | 701 | putative alpha-mannosidase [Oryza sativa Japonica Group] |
GenBank | EAY96947.1 | 0 | 27 | 642 | 86 | 701 | hypothetical protein OsI_18866 [Oryza sativa Indica Group] |
RefSeq | NP_001054909.1 | 0 | 7 | 642 | 10 | 645 | Os05g0209100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148788.1 | 0 | 1 | 642 | 1 | 642 | LOC100282405 [Zea mays] |
RefSeq | XP_002440782.1 | 0 | 1 | 642 | 1 | 642 | hypothetical protein SORBIDRAFT_09g006500 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fo3_A | 0 | 126 | 635 | 2 | 460 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 1fo2_A | 0 | 126 | 635 | 2 | 460 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1fmi_A | 0 | 126 | 631 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1x9d_A | 0 | 106 | 635 | 68 | 538 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1dl2_A | 0 | 135 | 642 | 6 | 505 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO845862 | 338 | 275 | 612 | 0 |
GO864530 | 314 | 189 | 502 | 0 |
GO864806 | 297 | 251 | 547 | 0 |
JG968843 | 266 | 316 | 581 | 0 |
BG837941 | 273 | 371 | 643 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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