| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si021474m |
| Family | CBM49 |
| Protein Properties | Length: 624 Molecular Weight: 68446.3 Isoelectric Point: 8.8991 |
| Chromosome | Chromosome/Scaffold: 3 Start: 4840201 End: 4842436 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 530 | 607 | 6.3e-35 |
| IEIEQNVTRTWAMRRATYSRYSVTVTNRSRKTVRELHLGVSELRGRLWGLDKARYGFVPPKWMAALRAGESLRFVYVQ | |||
| GH9 | 29 | 487 | 0 |
| DYALALKKSILYFEAQRSGVLPPNQRVTWRENSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWGILEYGKQMAAAGELRNAMDAVKWGTDYF IKAHPEPDVLYGEVGDGDTDHSCWQRPEDMSTSRQAFRIDPQNPGSDLAGETAAAMAAASLVFRNTYPGYANLLLEHSKQLFTFADKYRGKYDASITVAR NYYGSFSGYGDELLWAAAWLYEATEEGCYLEYLVRNGDALGGTGWSINQFGWDVKYPGVQVLAAKFLLQGRAGAHAAALQRYRQNAEFFVCSCVGKGAAN VPRTPGGMMYHQRWNNLQFVTSASFLLTVYADYATKLPGGGGAVRCPGGAARPFEILAFVRSQVNYILGDNPRGTSYMVGYGRSFPRQVHHRGASIVSVR RDPSFVSCQEGYSSWYPRQAGNPNVLEGAIYDDFADERNNYEQTEAATYNSAPLLGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 624 Download |
| MAKNVLALLG LILALASVVG MASGAGGHDY ALALKKSILY FEAQRSGVLP PNQRVTWREN 60 SGLFDGKANG VDLVGGYYDA GDNVKFGLPM AFTVTMMSWG ILEYGKQMAA AGELRNAMDA 120 VKWGTDYFIK AHPEPDVLYG EVGDGDTDHS CWQRPEDMST SRQAFRIDPQ NPGSDLAGET 180 AAAMAAASLV FRNTYPGYAN LLLEHSKQLF TFADKYRGKY DASITVARNY YGSFSGYGDE 240 LLWAAAWLYE ATEEGCYLEY LVRNGDALGG TGWSINQFGW DVKYPGVQVL AAKFLLQGRA 300 GAHAAALQRY RQNAEFFVCS CVGKGAANVP RTPGGMMYHQ RWNNLQFVTS ASFLLTVYAD 360 YATKLPGGGG AVRCPGGAAR PFEILAFVRS QVNYILGDNP RGTSYMVGYG RSFPRQVHHR 420 GASIVSVRRD PSFVSCQEGY SSWYPRQAGN PNVLEGAIYD DFADERNNYE QTEAATYNSA 480 PLLGVLARLA GACGTGLEEY QLPPAANQTS PPPPAHRRRP HRHAAQSSPI EIEQNVTRTW 540 AMRRATYSRY SVTVTNRSRK TVRELHLGVS ELRGRLWGLD KARYGFVPPK WMAALRAGES 600 LRFVYVQPGE TPANVWVTGY KLV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00759 | Glyco_hydro_9 | 9.0e-175 | 29 | 487 | 467 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 28 | 623 | 606 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 29 | 621 | 602 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 29 | 499 | 479 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 29 | 490 | 468 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN25631.1 | 0 | 1 | 623 | 1 | 623 | unknown [Zea mays] |
| GenBank | ACN27322.1 | 0 | 68 | 623 | 5 | 561 | unknown [Zea mays] |
| GenBank | EAY96964.1 | 0 | 1 | 623 | 1 | 626 | hypothetical protein OsI_18884 [Oryza sativa Indica Group] |
| RefSeq | NP_001054920.1 | 0 | 1 | 623 | 1 | 629 | Os05g0212300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002440792.1 | 0 | 1 | 623 | 1 | 627 | hypothetical protein SORBIDRAFT_09g006670 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 28 | 489 | 3 | 428 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1ksc_A | 0 | 28 | 489 | 3 | 428 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1ks8_A | 0 | 28 | 489 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 29 | 511 | 5 | 461 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 29 | 511 | 5 | 461 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
