Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si021490m |
Family | GH3 |
Protein Properties | Length: 617 Molecular Weight: 66888.1 Isoelectric Point: 5.1157 |
Chromosome | Chromosome/Scaffold: 3 Start: 18150509 End: 18154557 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 87 | 325 | 0 |
LASRLGVPILYGTDAVHGHNNVYGATVFPHNVGIGATRDTELARRIGEATALEVRATGIHWTFAPCVAVCRDPRWGRCYESYSEDPEIVRSMTTIVSGLQ GQPPADHPHGYPFLASVRENVLACAKHFVGDGGTDKGVNEGNAICSYEDLEAIHMTPYPDCIAQGVATVMASYSKWNGEPLHSSRYLLTDVLKGKLGFKG FVISDWEGIDRLCEPQQPRGSDYRYCIAQSVNAGMDMIM |
Full Sequence |
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Protein Sequence Length: 617 Download |
MAAGEAAPLY RDASAPVEAR VRDLLGRMTL REKAAQMAQI ERTVASPRAL TELGAGSVLN 60 AGGSAPRDRA SPADWAAMVD GMQRHALASR LGVPILYGTD AVHGHNNVYG ATVFPHNVGI 120 GATRDTELAR RIGEATALEV RATGIHWTFA PCVAVCRDPR WGRCYESYSE DPEIVRSMTT 180 IVSGLQGQPP ADHPHGYPFL ASVRENVLAC AKHFVGDGGT DKGVNEGNAI CSYEDLEAIH 240 MTPYPDCIAQ GVATVMASYS KWNGEPLHSS RYLLTDVLKG KLGFKGFVIS DWEGIDRLCE 300 PQQPRGSDYR YCIAQSVNAG MDMIMIPHRF EKFLEDIVFL VETGEIPMSR IDDAVERILR 360 VKFISGVFEH PFSDQSLLDT VGCKEHRLLA REAVCKSLVL LKNGKDQKAP FLPLAKNAKR 420 ILVAGTHADD IGYQCGGWTI AWHGDSGKIT LGTSILEAVQ ESMGVQTEVV YEKCPTEATI 480 ENGDFSYAVV VVGEVPYAEW TGDRTDLGIP FNGSELITRV ASKIPTLVIV ISGRPLVIES 540 QVLEKIEALV AAWLPGSECT GITDCLFGDH DFIGTLPVTW YRSVDQLPIN AGDANYDPLF 600 PVGYGLKMFQ SGDGST* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-39 | 12 | 598 | 627 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-47 | 398 | 606 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-81 | 6 | 606 | 672 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 6.0e-89 | 29 | 361 | 337 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 2.0e-96 | 28 | 462 | 448 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI16000.1 | 0 | 28 | 612 | 1 | 583 | unnamed protein product [Vitis vinifera] |
GenBank | EEC79317.1 | 0 | 16 | 610 | 13 | 604 | hypothetical protein OsI_20160 [Oryza sativa Indica Group] |
GenBank | EEE63918.1 | 0 | 16 | 610 | 13 | 604 | hypothetical protein OsJ_18743 [Oryza sativa Japonica Group] |
RefSeq | NP_001145784.1 | 0 | 2 | 616 | 5 | 619 | hypothetical protein LOC100279291 [Zea mays] |
RefSeq | XP_002279757.1 | 0 | 9 | 612 | 116 | 717 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 9 | 606 | 4 | 597 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1x38_A | 0 | 9 | 606 | 4 | 597 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1lq2_A | 0 | 9 | 606 | 4 | 597 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 9 | 606 | 4 | 597 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 9 | 606 | 4 | 597 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO800387 | 342 | 172 | 513 | 0 |
GO876678 | 321 | 236 | 556 | 0 |
JG937846 | 275 | 233 | 507 | 0 |
HO784016 | 432 | 56 | 486 | 0 |
GO876678 | 73 | 515 | 577 | 2.6 |
Sequence Alignments (This image is cropped. Click for full image.) |
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