| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si021657m |
| Family | GT31 |
| Protein Properties | Length: 554 Molecular Weight: 60479.4 Isoelectric Point: 10.2262 |
| Chromosome | Chromosome/Scaffold: 3 Start: 49520164 End: 49523935 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 423 | 551 | 5.32493e-44 |
| ERMAIRKTWMQFPAIQLGNVVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELVVLKTVAICQYGVQNVTADYIMKCDDDTFVRLDIVLQQITT YNRTLPLYLGNLNLLHRPLRRGKWAVTYE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 554 Download |
| MKRARSSEVF VGGSRLRARR RLAPLLAAAA FAYLLFVSVK LAGFGGAGPA GAVSRLSAAG 60 AGAGEPLRGR VEQPAVPRAR ARPAAAVSGY GRITGEILRR QESGGGRRRR WGQLGNFTEL 120 ERTAAEAWAL GAKAWEEASA FAGDVDSIAS RDAGECPGSL ALGGGGEAAA FLPCGLAAGS 180 AVTVVGTPRA ARPEYVEALE RSGAGNGTVM VAQFAVELRG LRAADGEEPP RILHLNPRLR 240 GDWSGRPVLE MNTCFRMQWG RAQRCDGTPS RDDAQVDGFR KCEKWQRRDI VESKETKTSS 300 WFNRFIGRAK KPEMTWPFPF SEGKMFVLTI QAGVEGYHIN VGGRHVASFP HRMGFALEDA 360 TGLAVTGGID VHSVYATALP RAHPSFSLQQ VLEMSEKWKA RPVPVEPIQL FVGILSATNH 420 FAERMAIRKT WMQFPAIQLG NVVARFFVAL SHRKEINAAL KKEAEYFGDI VILPFIDRYE 480 LVVLKTVAIC QYGVQNVTAD YIMKCDDDTF VRLDIVLQQI TTYNRTLPLY LGNLNLLHRP 540 LRRGKWAVTY EVP* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01762 | Galactosyl_T | 1.0e-13 | 422 | 517 | 99 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| smart00908 | Gal-bind_lectin | 2.0e-17 | 173 | 374 | 202 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 1.0e-17 | 171 | 374 | 204 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 1.0e-21 | 172 | 374 | 203 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| PLN03133 | PLN03133 | 2.0e-71 | 172 | 551 | 387 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA99401.2 | 0 | 1 | 551 | 1 | 554 | Galactosyltransferase family, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC69670.1 | 0 | 1 | 551 | 1 | 554 | hypothetical protein OsI_39103 [Oryza sativa Indica Group] |
| GenBank | EEE53604.1 | 0 | 70 | 551 | 4 | 490 | hypothetical protein OsJ_36860 [Oryza sativa Japonica Group] |
| RefSeq | NP_001130382.1 | 0 | 1 | 551 | 1 | 544 | hypothetical protein LOC100191478 [Zea mays] |
| RefSeq | XP_002442535.1 | 0 | 1 | 551 | 1 | 514 | hypothetical protein SORBIDRAFT_08g021470 [Sorghum bicolor] |
