Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si021715m |
Family | GT8 |
Protein Properties | Length: 536 Molecular Weight: 61221.3 Isoelectric Point: 8.697 |
Chromosome | Chromosome/Scaffold: 3 Start: 46801759 End: 46806652 |
Description | galacturonosyltransferase 13 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 174 | 504 | 0 |
CLSLRLTDEYSSNALARKQLPPPELVPRLSDNSYYHFVLASDNILAASVVVRSTVKSSLNPERIVFHVITDKKTYPAMHSWFALNSLYPAIVEVKGVHQF DWLTKENVPVLEAIETQRTVRDRFRGNHLARTSASDSPRVFAAKLQAGSPTYTSVLNHIRIYLPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLAGNVNG AVETCRGGDSWVMSKRFRNYFNFSHPLIASNFDPSECAWAYGMNIFDLNAWRKTTIKDKYHHWVKENLKSNFTLWRLGTLPPGLIAFKGHVHPIDPSWHL LGLGYQEKTDISSVEQAAVIHYNGQSKPWLE |
Full Sequence |
---|
Protein Sequence Length: 536 Download |
MQIRLSPSMR SITISTSHGL LDLMRLKAAA RHFSYRTVFH TVLILAFLLP FVFILTAVMT 60 LEGFNKCSSL DCLGRRLGPR LLGRGNDGSM RLVRDLYSML DEINSEEGPV DLKVPESFDE 120 FIWDMKNNDY DLRSFAFKLK ATMESMDKEL RSSRLSEQLN KHYAAIAIPK GLYCLSLRLT 180 DEYSSNALAR KQLPPPELVP RLSDNSYYHF VLASDNILAA SVVVRSTVKS SLNPERIVFH 240 VITDKKTYPA MHSWFALNSL YPAIVEVKGV HQFDWLTKEN VPVLEAIETQ RTVRDRFRGN 300 HLARTSASDS PRVFAAKLQA GSPTYTSVLN HIRIYLPELF PSLNKVVFLD DDVVVQHDLS 360 PLWDIDLAGN VNGAVETCRG GDSWVMSKRF RNYFNFSHPL IASNFDPSEC AWAYGMNIFD 420 LNAWRKTTIK DKYHHWVKEN LKSNFTLWRL GTLPPGLIAF KGHVHPIDPS WHLLGLGYQE 480 KTDISSVEQA AVIHYNGQSK PWLEIGFKHL QPFWTRHVNY SNEFIKNCHI MEPQL* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 4.0e-135 | 126 | 530 | 405 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 3.0e-142 | 130 | 530 | 405 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 533 | 534 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 530 | 535 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 0 | 6 | 531 | 535 | + Probable galacturonosyltransferase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY83641.1 | 0 | 90 | 535 | 1 | 446 | hypothetical protein OsI_38869 [Oryza sativa Indica Group] |
RefSeq | NP_001067123.1 | 0 | 1 | 535 | 1 | 554 | Os12g0578500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001145771.1 | 0 | 1 | 535 | 1 | 535 | hypothetical protein LOC100279278 [Zea mays] |
RefSeq | XP_002284273.1 | 0 | 1 | 532 | 1 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002443426.1 | 0 | 1 | 535 | 1 | 535 | hypothetical protein SORBIDRAFT_08g019260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.000001 | 320 | 502 | 70 | 252 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1g9r_A | 0.000001 | 320 | 502 | 70 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.000001 | 320 | 502 | 70 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |