Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si021971m |
Family | CBM43 |
Protein Properties | Length: 467 Molecular Weight: 50041 Isoelectric Point: 5.2665 |
Chromosome | Chromosome/Scaffold: 3 Start: 645592 End: 647680 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 381 | 463 | 3.6e-30 |
WCVPKPAADEMMLQENIDFACGQEGIDCAAIRPGGVCHEPDTVQAHAAYAMNLFFQSNGHHAFNCDFGQTGVVTTADPSYGDC | |||
GH17 | 31 | 348 | 0 |
VGVNYGTRGTTLPAPADVARFLVRETVVDRVRLLDADPAVLRALAGTGLAVDVTVPNGVVPRLVSLAFARRWVRENVVPHARAATNISRVLVGDEVTTEA NRTLLLALVPAMQNLHTALAAESLHGRVKVSTTHSLGVLTSTERPSAARFRDGYDAAIVKPLLRFLRATAAPFMVNAYPFYGLTNENDTLDFALFRVNSG VVDEGSGLVYSNMLDAQLDAVHSAIRRLGFGDVDIAVSETGWPSAGEDWEVGVGKDLAREYNRNAIRHLGSGVGTPLMPNRTFEVSIFSLFDENLKPGPV SQRNFGLFRGDMTPVYDA |
Full Sequence |
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Protein Sequence Length: 467 Download |
MRLPTVLVQI LLLPMLLWIS AVIKGADAGG VGVNYGTRGT TLPAPADVAR FLVRETVVDR 60 VRLLDADPAV LRALAGTGLA VDVTVPNGVV PRLVSLAFAR RWVRENVVPH ARAATNISRV 120 LVGDEVTTEA NRTLLLALVP AMQNLHTALA AESLHGRVKV STTHSLGVLT STERPSAARF 180 RDGYDAAIVK PLLRFLRATA APFMVNAYPF YGLTNENDTL DFALFRVNSG VVDEGSGLVY 240 SNMLDAQLDA VHSAIRRLGF GDVDIAVSET GWPSAGEDWE VGVGKDLARE YNRNAIRHLG 300 SGVGTPLMPN RTFEVSIFSL FDENLKPGPV SQRNFGLFRG DMTPVYDAGI FTDPEVVEPV 360 STKVTPAPGQ EATPAATGRQ WCVPKPAADE MMLQENIDFA CGQEGIDCAA IRPGGVCHEP 420 DTVQAHAAYA MNLFFQSNGH HAFNCDFGQT GVVTTADPSY GDCIFM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-20 | 380 | 452 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-40 | 380 | 465 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-85 | 31 | 347 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ86292.1 | 0 | 25 | 465 | 772 | 1215 | H0124B04.9 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC78268.1 | 0 | 24 | 465 | 467 | 911 | hypothetical protein OsI_17962 [Oryza sativa Indica Group] |
GenBank | EEE61922.1 | 0 | 24 | 465 | 467 | 891 | hypothetical protein OsJ_16662 [Oryza sativa Japonica Group] |
RefSeq | NP_001151529.1 | 0 | 21 | 466 | 19 | 450 | LOC100285163 [Zea mays] |
RefSeq | XP_002448791.1 | 0 | 19 | 466 | 18 | 464 | hypothetical protein SORBIDRAFT_06g033250 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 347 | 1 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 31 | 338 | 2 | 303 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 31 | 338 | 2 | 303 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 31 | 338 | 2 | 303 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 31 | 338 | 2 | 303 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |