Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si022126m |
Family | GT14 |
Protein Properties | Length: 427 Molecular Weight: 47372.1 Isoelectric Point: 7.4777 |
Chromosome | Chromosome/Scaffold: 3 Start: 50533382 End: 50536305 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 75 | 335 | 0 |
IAFLISGSAKDASALRRVLLALYHPRNRYILHLDAEAPDSDRRDLAAALAAHPVIAAADNVRVVDRANLITYRGPTMVANTLHAAAAFLWGHAGDGGSDW DWFINLSASDYPLVTQDDLIHVFSKLPRDLNFIDHTSDIGWKEFQRAKPVIIDPGLYMKKKADVFWIPQRRSVPTAFKLFTGSAWMALSRPFVEYCIWGW DNLPRTVLMYYSNFISSPEGYFHTVVCNAEEFKNTTVNHDLHYISWDNPPKQHPHYLTVED |
Full Sequence |
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Protein Sequence Length: 427 Download |
MKPLLSQSLH AAVDRRWLLP LAVGSALSLL LLVALTTFPL PFPSSSSSTP SSALFVEHKL 60 SPTPPSPAGA SLPRIAFLIS GSAKDASALR RVLLALYHPR NRYILHLDAE APDSDRRDLA 120 AALAAHPVIA AADNVRVVDR ANLITYRGPT MVANTLHAAA AFLWGHAGDG GSDWDWFINL 180 SASDYPLVTQ DDLIHVFSKL PRDLNFIDHT SDIGWKEFQR AKPVIIDPGL YMKKKADVFW 240 IPQRRSVPTA FKLFTGSAWM ALSRPFVEYC IWGWDNLPRT VLMYYSNFIS SPEGYFHTVV 300 CNAEEFKNTT VNHDLHYISW DNPPKQHPHY LTVEDLDRMV ASDAPFARKF HADDPVLDRI 360 DGEILSRSVD MPTPGGWCAG TRENGSDPCS VIGDTSLLRP GRGAVRLQRL MTSLLSEEKF 420 HPRQCK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 5.0e-67 | 75 | 340 | 270 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 5.0e-180 | 59 | 426 | 368 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS88559.1 | 0 | 53 | 426 | 49 | 425 | glycosylation enzyme-like protein [Triticum monococcum] |
GenBank | AAV49991.1 | 0 | 1 | 426 | 1 | 425 | putative N-acetylglucosaminyltransferase [Hordeum vulgare subsp. vulgare] |
EMBL | CAH05144.1 | 0 | 53 | 426 | 49 | 425 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Aegilops tauschii] |
EMBL | CAH10066.1 | 0 | 53 | 426 | 49 | 425 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Triticum turgidum] |
RefSeq | XP_002442623.1 | 0 | 1 | 426 | 1 | 425 | hypothetical protein SORBIDRAFT_08g023170 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000004 | 89 | 296 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000004 | 89 | 296 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000004 | 89 | 296 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000004 | 89 | 296 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000001 | 89 | 296 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |