Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si022136m |
Family | GT14 |
Protein Properties | Length: 426 Molecular Weight: 46923.7 Isoelectric Point: 9.6441 |
Chromosome | Chromosome/Scaffold: 3 Start: 2185638 End: 2188907 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 77 | 324 | 0 |
LAYLLIGARGDGRRLLRLLLAVYHPRNRYVLHLSADAPDDERRSLAAGVFAAAPAVGAFENVAVVGNPTAGTPVGSSGLAGTLRAAAVLLRLHPDWDWFV TLNAADYPLVTQDDLIHALSSVPRDLNFIYHTSNIGSKEPEKVQQIIVDAGIYLSGRTNFFRATQKRPAPEAFKFFTGSPWVILNRRFIEYCVLAWENLP RILLMYFNNIIQPQEGYFHSVICNSLEFRNFTVNNDLRFMQRDDPAQT |
Full Sequence |
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Protein Sequence Length: 426 Download |
MGTGMGGAKG GAGGGGWLPG ERWWRVLFLA LAAVSFLISL ILLFLSAPRL RLPGVAPSAS 60 AAAVSTVRRG PDAPPCLAYL LIGARGDGRR LLRLLLAVYH PRNRYVLHLS ADAPDDERRS 120 LAAGVFAAAP AVGAFENVAV VGNPTAGTPV GSSGLAGTLR AAAVLLRLHP DWDWFVTLNA 180 ADYPLVTQDD LIHALSSVPR DLNFIYHTSN IGSKEPEKVQ QIIVDAGIYL SGRTNFFRAT 240 QKRPAPEAFK FFTGSPWVIL NRRFIEYCVL AWENLPRILL MYFNNIIQPQ EGYFHSVICN 300 SLEFRNFTVN NDLRFMQRDD PAQTEAPFLS REHYGQMVDS GAPFARPFRE NDPLLDQIDG 360 NILKRWSRGP VPGAWCSGTK RWFSDPCSQW GNVNIVRPGP QAVKLHQYVN QTLEEAKSRS 420 NSCRR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 5.0e-43 | 97 | 338 | 246 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 3.0e-108 | 71 | 424 | 354 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU44151.1 | 0 | 48 | 425 | 20 | 406 | unknow protein [Oryza sativa Japonica Group] |
DDBJ | BAH92951.1 | 0 | 48 | 424 | 20 | 399 | Os05g0152400 [Oryza sativa Japonica Group] |
GenBank | EEC78537.1 | 0 | 48 | 425 | 50 | 430 | hypothetical protein OsI_18492 [Oryza sativa Indica Group] |
RefSeq | NP_001130356.1 | 0 | 4 | 425 | 2 | 421 | hypothetical protein LOC100191451 [Zea mays] |
RefSeq | XP_002439297.1 | 0 | 4 | 425 | 2 | 421 | hypothetical protein SORBIDRAFT_09g004030 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000000002 | 91 | 279 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000000002 | 91 | 279 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000000002 | 91 | 279 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000000002 | 91 | 279 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000000004 | 91 | 279 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |