| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si022417m |
| Family | CE8 |
| Protein Properties | Length: 369 Molecular Weight: 39560.6 Isoelectric Point: 7.3253 |
| Chromosome | Chromosome/Scaffold: 3 Start: 47475793 End: 47477064 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 56 | 352 | 0 |
| AVVSNGGGNHYATINQALAAAPPPAADGTPARRYVIHVRSGTYDEIVNITRSDVTLIGDGMGRTVITGNHCNRTGHDVLQSATLSVNGTGFMARDLTIKN TAGVDAGPAVALMNLADSSICYKCEIDGYQDTLNADCNRQFYHTCNISGTVDFVFGYAKAVFQQCNLLVRRPVPDGHCVVTAQGRGGPNDVSGFVFQDST VAALPGVDLNGVPTYLGRPWKNHSHVVFMNCFLDGIIHPAGWEGWKDYERLGNIFYGEYQNRGDGANTQGRVKWPGFHIIKDAAEAANFTVQRFIQG | |||
| Full Sequence |
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| Protein Sequence Length: 369 Download |
| MAPAGVIALA MLALLTSAGG GGHAAAEQQQ EAAGMPRWVE PRLRRLLGTR RHKVDAVVSN 60 GGGNHYATIN QALAAAPPPA ADGTPARRYV IHVRSGTYDE IVNITRSDVT LIGDGMGRTV 120 ITGNHCNRTG HDVLQSATLS VNGTGFMARD LTIKNTAGVD AGPAVALMNL ADSSICYKCE 180 IDGYQDTLNA DCNRQFYHTC NISGTVDFVF GYAKAVFQQC NLLVRRPVPD GHCVVTAQGR 240 GGPNDVSGFV FQDSTVAALP GVDLNGVPTY LGRPWKNHSH VVFMNCFLDG IIHPAGWEGW 300 KDYERLGNIF YGEYQNRGDG ANTQGRVKWP GFHIIKDAAE AANFTVQRFI QGDGWLPEFG 360 VKYKGGLE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 3.0e-99 | 36 | 367 | 340 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 6.0e-102 | 35 | 367 | 337 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02506 | PLN02506 | 1.0e-102 | 36 | 367 | 336 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 2.0e-103 | 36 | 368 | 339 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-122 | 55 | 353 | 303 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA94334.1 | 0 | 33 | 367 | 26 | 370 | Pectinesterase family protein [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY81365.1 | 0 | 33 | 367 | 26 | 370 | hypothetical protein OsI_36536 [Oryza sativa Indica Group] |
| GenBank | EAZ07184.1 | 0 | 31 | 367 | 206 | 558 | hypothetical protein OsI_29430 [Oryza sativa Indica Group] |
| RefSeq | NP_001061940.1 | 0 | 31 | 367 | 206 | 555 | Os08g0450100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002444448.1 | 0 | 32 | 367 | 234 | 582 | hypothetical protein SORBIDRAFT_07g022090 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 55 | 367 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 55 | 367 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 3e-25 | 46 | 325 | 22 | 332 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 3e-18 | 55 | 357 | 5 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 3e-18 | 55 | 357 | 5 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Signal Peptide | ||||
|---|---|---|---|---|
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| Cleavage Site | ||||
| 18 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EC939603 | 287 | 87 | 367 | 0 |
| DY801979 | 309 | 51 | 357 | 0 |
| DY829415 | 284 | 87 | 368 | 0 |
| EL419338 | 278 | 90 | 367 | 0 |
| CO361900 | 259 | 109 | 363 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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