Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si022606m |
Family | GH17 |
Protein Properties | Length: 336 Molecular Weight: 34775.4 Isoelectric Point: 4.5072 |
Chromosome | Chromosome/Scaffold: 3 Start: 23087159 End: 23089115 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 334 | 0 |
IGVSYGMSGDNLPPASTVVGMYKANGIPLMRIYAPDQAALEAVGGTGIRVVVGAPNDVLSSLAASPAAAAAWVRNNIAAYPDVTFRCVCVGNEVEGGAAQ NLVPAMENIRAALAAAGLDGIKVTTSVSQAILGGYKPPSAAEFTDEAQGFMGPVLEFLARTGAPLMASIYPYFTYATNPSAMDLSYALFTAPGTVLQDGT YGYQNLFDATVDSFYVAMANHGGAGVTLVVSESGWPSAGGVAASPENAALYNQNLINHVGRGTPRHPGAIETILFSMFNENLKESGVEQNWGLFYPNKQR VYPISF |
Full Sequence |
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Protein Sequence Length: 336 Download |
MARQGAASML ATALLLGVFA NVAPSVESIG VSYGMSGDNL PPASTVVGMY KANGIPLMRI 60 YAPDQAALEA VGGTGIRVVV GAPNDVLSSL AASPAAAAAW VRNNIAAYPD VTFRCVCVGN 120 EVEGGAAQNL VPAMENIRAA LAAAGLDGIK VTTSVSQAIL GGYKPPSAAE FTDEAQGFMG 180 PVLEFLARTG APLMASIYPY FTYATNPSAM DLSYALFTAP GTVLQDGTYG YQNLFDATVD 240 SFYVAMANHG GAGVTLVVSE SGWPSAGGVA ASPENAALYN QNLINHVGRG TPRHPGAIET 300 ILFSMFNENL KESGVEQNWG LFYPNKQRVY PISFN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-9 | 58 | 326 | 289 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-133 | 29 | 334 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PRF/SEQDB | 0 | 1 | 334 | 1 | 334 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
GenBank | ACG36462.1 | 0 | 2 | 334 | 3 | 336 | lichenase-2 precursor [Zea mays] |
RefSeq | NP_001148461.1 | 0 | 2 | 334 | 3 | 336 | lichenase-2 [Zea mays] |
RefSeq | NP_001150348.1 | 0 | 1 | 335 | 1 | 336 | lichenase-2 [Zea mays] |
RefSeq | XP_002441003.1 | 0 | 1 | 335 | 1 | 337 | hypothetical protein SORBIDRAFT_09g018750 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 29 | 334 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 29 | 334 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 29 | 334 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 29 | 334 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 29 | 334 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |