Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si022614m |
Family | GH17 |
Protein Properties | Length: 335 Molecular Weight: 35000.6 Isoelectric Point: 6.2297 |
Chromosome | Chromosome/Scaffold: 3 Start: 23153550 End: 23158081 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 334 | 0 |
IGVCYGMSANNLPPASTVIDMYKANGISAMRLYAPDQGALQAVGGSGISVTVGAPNDVLSNIAASPAAAASWVRNNIQAYPSVSFRYICVGNEVAGGAAQ NLAPAMENVHAALAAAGLGHIKVTTSVSQAILGVYSPPSAAEFTGEAKGYMGPVLSFLARTGSPLMANIYPYLAWAYNPSAMDMSYALFTSKGTVVQDGA YGYQNLFDTTVDAFYFAMGRHGGSGVPLVVSESGWPSGGGEQANAANARIYNQYLINHVGRGTPRHPGGIETYLFSMFNENQKDSGVEQNWGLFYPNMQH VYPISF |
Full Sequence |
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Protein Sequence Length: 335 Download |
MARQGVAAMF AMALLLGVFA SIPQSAEAIG VCYGMSANNL PPASTVIDMY KANGISAMRL 60 YAPDQGALQA VGGSGISVTV GAPNDVLSNI AASPAAAASW VRNNIQAYPS VSFRYICVGN 120 EVAGGAAQNL APAMENVHAA LAAAGLGHIK VTTSVSQAIL GVYSPPSAAE FTGEAKGYMG 180 PVLSFLARTG SPLMANIYPY LAWAYNPSAM DMSYALFTSK GTVVQDGAYG YQNLFDTTVD 240 AFYFAMGRHG GSGVPLVVSE SGWPSGGGEQ ANAANARIYN QYLINHVGRG TPRHPGGIET 300 YLFSMFNENQ KDSGVEQNWG LFYPNMQHVY PISF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-8 | 56 | 325 | 291 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-133 | 29 | 334 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PRF/SEQDB | 0 | 1 | 334 | 1 | 334 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
GenBank | ACG36462.1 | 0 | 2 | 334 | 3 | 336 | lichenase-2 precursor [Zea mays] |
EMBL | CAA80493.1 | 0 | 1 | 334 | 1 | 334 | (1,3;1,4) beta glucanase [Triticum aestivum] |
RefSeq | NP_001055377.1 | 0 | 1 | 334 | 1 | 334 | Os05g0375400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148461.1 | 0 | 2 | 334 | 3 | 336 | lichenase-2 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 29 | 334 | 1 | 306 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1aq0_B | 0 | 29 | 334 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 29 | 334 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 29 | 334 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 29 | 334 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |