Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si022731m |
Family | GH17 |
Protein Properties | Length: 312 Molecular Weight: 32671.8 Isoelectric Point: 5.9088 |
Chromosome | Chromosome/Scaffold: 3 Start: 23155211 End: 23158081 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 6 | 311 | 0 |
IGVCYGMSANNLPPASTVIDMYKANGISAMRLYAPDQGALQAVGGSGISVTVGAPNDVLSNIAASPAAAASWVRNNIQAYPSVSFRYICVGNEVAGGAAQ NLAPAMENVHAALAAAGLGHIKVTTSVSQAILGVYSPPSAAEFTGEAKGYMGPVLSFLARTGSPLMANIYPYLAWAYNPSAMDMSYALFTSKGTVVQDGA YGYQNLFDTTVDAFYFAMGRHGGSGVPLVVSESGWPSGGGEQANAANARIYNQYLINHVGRGTPRHPGGIETYLFSMFNENQKDSGVEQNWGLFYPNMQH VYPISF |
Full Sequence |
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Protein Sequence Length: 312 Download |
MCAEAIGVCY GMSANNLPPA STVIDMYKAN GISAMRLYAP DQGALQAVGG SGISVTVGAP 60 NDVLSNIAAS PAAAASWVRN NIQAYPSVSF RYICVGNEVA GGAAQNLAPA MENVHAALAA 120 AGLGHIKVTT SVSQAILGVY SPPSAAEFTG EAKGYMGPVL SFLARTGSPL MANIYPYLAW 180 AYNPSAMDMS YALFTSKGTV VQDGAYGYQN LFDTTVDAFY FAMGRHGGSG VPLVVSESGW 240 PSGGGEQANA ANARIYNQYL INHVGRGTPR HPGGIETYLF SMFNENQKDS GVEQNWGLFY 300 PNMQHVYPIS F* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-9 | 33 | 302 | 291 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-133 | 6 | 311 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PRF/SEQDB | 0 | 4 | 311 | 27 | 334 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
GenBank | ACG36462.1 | 0 | 3 | 311 | 28 | 336 | lichenase-2 precursor [Zea mays] |
RefSeq | NP_001148461.1 | 0 | 3 | 311 | 28 | 336 | lichenase-2 [Zea mays] |
Swiss-Prot | P12257 | 0 | 4 | 311 | 5 | 312 | GUB2_HORVU RecName: Full=Lichenase-2; AltName: Full=Lichenase II; AltName: Full=Endo-beta-1,3-1,4 glucanase II; AltName: Full=(1- |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 6 | 311 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 6 | 311 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 6 | 311 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 6 | 311 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 6 | 311 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE172973 | 236 | 77 | 312 | 0 |
EE013093 | 236 | 77 | 312 | 0 |
EC894804 | 236 | 77 | 312 | 0 |
FL900126 | 236 | 77 | 312 | 0 |
FL902757 | 236 | 77 | 312 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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