Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si024351m |
Family | GH5 |
Protein Properties | Length: 500 Molecular Weight: 56237.1 Isoelectric Point: 7.1525 |
Chromosome | Chromosome/Scaffold: 3 Start: 27515415 End: 27518946 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 113 | 442 | 2.7e-32 |
KPFYVNGFNAYWLMILAVDPSTRGKVTEVFQQVAAVGLTVCRTWSFNDGGWRALQKSPAVYEENVFKALDFVVSEARKYRIRLILSLINNWDGYGGKAQY VKWARDAGLNLTSDDDFFSDETVKGYFKNHVKGEHVYTNVTYKDDPTIFAWELMNELRCTSDPTGNKLQAWIQEMAFHVKSIDPDHLLEVGAEGFYGPSS PARLQANPNTYAGHVGTDFIRNHRVLGVDFASVHIYPDTWMSGAAVEAQLKFVQSWMQAHIADAEGVLSMPVVFTEFGVSTKARSAFNATWRDQFVQAVY GVLLASMRRGGAGAGGLLWQVFPEGTDYMD |
Full Sequence |
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Protein Sequence Length: 500 Download |
MVQCKHIYSS YTWPPYYSLT RSCCVIATTM KTIFREKARG KVWMIQLILV RGIAVAATIL 60 LLTDGSHAHV DRVEMLRDEL PPVQRPNVNG EMIRDEQWRM VKTRGSQFVI GDKPFYVNGF 120 NAYWLMILAV DPSTRGKVTE VFQQVAAVGL TVCRTWSFND GGWRALQKSP AVYEENVFKA 180 LDFVVSEARK YRIRLILSLI NNWDGYGGKA QYVKWARDAG LNLTSDDDFF SDETVKGYFK 240 NHVKGEHVYT NVTYKDDPTI FAWELMNELR CTSDPTGNKL QAWIQEMAFH VKSIDPDHLL 300 EVGAEGFYGP SSPARLQANP NTYAGHVGTD FIRNHRVLGV DFASVHIYPD TWMSGAAVEA 360 QLKFVQSWMQ AHIADAEGVL SMPVVFTEFG VSTKARSAFN ATWRDQFVQA VYGVLLASMR 420 RGGAGAGGLL WQVFPEGTDY MDDGYGVVLP RAKDTAGIIS AHSKRLLIFN SRCAWSCRWG 480 CKKEEQSEDG DDLLLHDVL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.0003 | 201 | 394 | 214 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 3.0e-26 | 108 | 480 | 382 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19893.1 | 0 | 93 | 489 | 56 | 455 | unknown [Glycine max] |
EMBL | CBI18019.1 | 0 | 95 | 499 | 67 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273230.1 | 0 | 95 | 499 | 6 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002273389.1 | 0 | 95 | 499 | 6 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002466346.1 | 0 | 26 | 483 | 4 | 486 | hypothetical protein SORBIDRAFT_01g006080 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 99 | 466 | 5 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 104 | 445 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 104 | 445 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 104 | 445 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 104 | 445 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |