Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si024558m |
Family | GH17 |
Protein Properties | Length: 351 Molecular Weight: 36817 Isoelectric Point: 8.027 |
Chromosome | Chromosome/Scaffold: 3 Start: 13028156 End: 13029208 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 36 | 346 | 0 |
GVCYGFIGDNLPSRAEVVQLYKSRNISAMRIYHPDPEALAALRGSGIALVLDVGGVDAIRALAGSAAAAAVWVEANVQAYYPDVLIRYVAVGNEVPAGDD AAGLILPAMRNVRAALAAAGLAGAVRVSTAVRMDVITDSFPPSRGVFSASAGRHMPPVARFLADTGAPLLANVYPYFAYRDNPRDIALAYATFQPGAAAV RDGGSGLAYTNLFAAMVDAIHAALEKAGAPGVGVVVSESGWPSAGGFAATVENARRYNQGLIDQAYRGTPKRPGVLETYVFAMFNENQKPGDPTERNFGL FYPNKQPVYPI |
Full Sequence |
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Protein Sequence Length: 351 Download |
MGGVGSVRRW ISCTLLIAAI FLSFDHQQAC AAGAYGVCYG FIGDNLPSRA EVVQLYKSRN 60 ISAMRIYHPD PEALAALRGS GIALVLDVGG VDAIRALAGS AAAAAVWVEA NVQAYYPDVL 120 IRYVAVGNEV PAGDDAAGLI LPAMRNVRAA LAAAGLAGAV RVSTAVRMDV ITDSFPPSRG 180 VFSASAGRHM PPVARFLADT GAPLLANVYP YFAYRDNPRD IALAYATFQP GAAAVRDGGS 240 GLAYTNLFAA MVDAIHAALE KAGAPGVGVV VSESGWPSAG GFAATVENAR RYNQGLIDQA 300 YRGTPKRPGV LETYVFAMFN ENQKPGDPTE RNFGLFYPNK QPVYPIIFPN * 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 2.0e-135 | 42 | 348 | 308 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY77194.1 | 0 | 33 | 349 | 3 | 316 | hypothetical protein OsI_05163 [Oryza sativa Indica Group] |
RefSeq | NP_001045385.1 | 0 | 33 | 349 | 3 | 316 | Os01g0946600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001045386.1 | 0 | 33 | 349 | 3 | 316 | Os01g0946700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002441397.1 | 0 | 15 | 350 | 1 | 336 | hypothetical protein SORBIDRAFT_09g025890 [Sorghum bicolor] |
RefSeq | XP_002456922.1 | 0 | 33 | 350 | 3 | 317 | hypothetical protein SORBIDRAFT_03g045630 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 36 | 348 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 36 | 348 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 36 | 348 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 36 | 348 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 36 | 348 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |