Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si024756m |
Family | GH9 |
Protein Properties | Length: 434 Molecular Weight: 46164.7 Isoelectric Point: 7.0089 |
Chromosome | Chromosome/Scaffold: 3 Start: 3136639 End: 3138354 |
Description | glycosyl hydrolase 9B12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 2 | 433 | 0 |
DYRAALANSLLYFEGQRSGKLPPDQRVQWRGDSALADGRDHGVDLTGGYYDSGDNVKFGPPMAFTVTMLTWGVVEYARPLAAAGELRNALAAVRWAADYL ARAHAAAETLYVQVGDGDSDHSCWQRPEDMDTPRTAYSVDASRPGSDVAAETAAALAAAAVAFRRLDSGYSAMLLGHAEQLFRFAKNRRGLYHKSVPGAA KFYPSSGDEDELIWAAVWLFVATGGADYKAFILGDGNSGGVQSALSWYNKFLGAQALLILDGKLPDAGNPAAMKRSLEQFLCNVAQHGGGAKLSPGGMLW TQPWNNLQFVTSAAFVAAAHADHLAGASLRCGGWAALPPPQLLSFARSQADYILGANPGQMSYMVGFGARFPERVRHRGASVPSIKSSPGKITCKGGFDY FSRSTPNPNVLVGAIVGGPDGNDQYSDSRENF |
Full Sequence |
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Protein Sequence Length: 434 Download |
PDYRAALANS LLYFEGQRSG KLPPDQRVQW RGDSALADGR DHGVDLTGGY YDSGDNVKFG 60 PPMAFTVTML TWGVVEYARP LAAAGELRNA LAAVRWAADY LARAHAAAET LYVQVGDGDS 120 DHSCWQRPED MDTPRTAYSV DASRPGSDVA AETAAALAAA AVAFRRLDSG YSAMLLGHAE 180 QLFRFAKNRR GLYHKSVPGA AKFYPSSGDE DELIWAAVWL FVATGGADYK AFILGDGNSG 240 GVQSALSWYN KFLGAQALLI LDGKLPDAGN PAAMKRSLEQ FLCNVAQHGG GAKLSPGGML 300 WTQPWNNLQF VTSAAFVAAA HADHLAGASL RCGGWAALPP PQLLSFARSQ ADYILGANPG 360 QMSYMVGFGA RFPERVRHRG ASVPSIKSSP GKITCKGGFD YFSRSTPNPN VLVGAIVGGP 420 DGNDQYSDSR ENF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 5.0e-135 | 2 | 433 | 448 | + endoglucanase | ||
PLN02340 | PLN02340 | 6.0e-139 | 2 | 433 | 448 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 6.0e-141 | 2 | 433 | 444 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 4.0e-145 | 2 | 433 | 439 | + endoglucanase | ||
PLN00119 | PLN00119 | 3.0e-166 | 2 | 433 | 439 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25463.1 | 0 | 2 | 433 | 24 | 462 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001054543.1 | 0 | 2 | 433 | 24 | 489 | Os05g0129200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002269618.1 | 0 | 2 | 433 | 24 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272408.1 | 0 | 2 | 433 | 24 | 459 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002440523.1 | 0 | 1 | 433 | 30 | 462 | hypothetical protein SORBIDRAFT_09g002490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 2 | 433 | 4 | 408 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1ksc_A | 0 | 2 | 433 | 4 | 408 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1ks8_A | 0 | 2 | 433 | 4 | 408 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 2 | 433 | 5 | 420 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 2 | 433 | 5 | 420 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO783495 | 380 | 6 | 370 | 0 |
EC958178 | 253 | 2 | 254 | 0 |
EB428434 | 247 | 2 | 247 | 0 |
DT746175 | 271 | 2 | 268 | 0 |
DY287831 | 322 | 2 | 309 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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