Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si024819m |
Family | GH3 |
Protein Properties | Length: 620 Molecular Weight: 67232.7 Isoelectric Point: 5.2008 |
Chromosome | Chromosome/Scaffold: 3 Start: 26137982 End: 26140720 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 90 | 328 | 0 |
LSSRLGVPILYGTDAVHGHNNVFGATVFPHNVGLGAARDPELVRRIGEATALEVRATGIKWTFAPCVAVCRDPRWGRCYESYSEDPEMVRSLATIVTGLQ GEPPADHPHGYPFLGSVREKVLACAKHFVGDGGTDRGINEGNTICSYDELEDIHMAPYLDCMAQGVATVMASHSKWNGERLHSCRCLLTDVLKGKLGFKG FVISDWKGIDKICEPRAPQGSEYRYCIAQSVNAGMDMIM |
Full Sequence |
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Protein Sequence Length: 620 Download |
MATTQAQGHA MPPYKDASAL VEVRVRDLLG RMTLREKAAQ MAQIERTVAS ARALTELGAG 60 SVLNGGGSAP GDRSPACWAD MVDGMQRLAL SSRLGVPILY GTDAVHGHNN VFGATVFPHN 120 VGLGAARDPE LVRRIGEATA LEVRATGIKW TFAPCVAVCR DPRWGRCYES YSEDPEMVRS 180 LATIVTGLQG EPPADHPHGY PFLGSVREKV LACAKHFVGD GGTDRGINEG NTICSYDELE 240 DIHMAPYLDC MAQGVATVMA SHSKWNGERL HSCRCLLTDV LKGKLGFKGF VISDWKGIDK 300 ICEPRAPQGS EYRYCIAQSV NAGMDMIMIP YRFEEFLEHL VSLVETGEIP LSRIDDAVER 360 ILRVKFISGV FEHPFSDPSL LDIIGCKEHR LLAREAVRKS MVLLKNGKNQ KEPFLPLVKN 420 VKRILVTGTH ADDIGFQCGG WTVGWNGNSG KITPGTSILE AIKESVGVQT EVVYEACATE 480 ATIESGEFSY AVVVVGEVPY SETVGDRTDL SIPFNGSDLI TRVASTIPTL VIVVSGRPLD 540 IETQVLEKID ALVAAWLPGT EGMGIADCLF GYQDFVGKLP VTWHRSVDQL PINSGDANYD 600 PLFPVGYGLN MFQSDDNST* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-41 | 2 | 601 | 663 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-50 | 401 | 610 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-81 | 1 | 609 | 692 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 5.0e-84 | 33 | 364 | 336 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 2.0e-89 | 32 | 466 | 445 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC79317.1 | 0 | 21 | 615 | 14 | 606 | hypothetical protein OsI_20160 [Oryza sativa Indica Group] |
GenBank | EEE63918.1 | 0 | 21 | 615 | 14 | 606 | hypothetical protein OsJ_18743 [Oryza sativa Japonica Group] |
RefSeq | NP_001145784.1 | 0 | 5 | 619 | 4 | 619 | hypothetical protein LOC100279291 [Zea mays] |
RefSeq | NP_190284.1 | 0 | 14 | 610 | 10 | 604 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002279757.1 | 0 | 14 | 610 | 117 | 712 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 14 | 609 | 5 | 597 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1iex_A | 0 | 14 | 609 | 5 | 597 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1iew_A | 0 | 14 | 609 | 5 | 597 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1iev_A | 0 | 14 | 609 | 5 | 597 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ieq_A | 0 | 14 | 609 | 5 | 597 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO800387 | 342 | 175 | 516 | 0 |
GO876678 | 322 | 239 | 560 | 0 |
HO784016 | 432 | 60 | 489 | 0 |
DY265467 | 332 | 139 | 470 | 0 |
HO784016 | 48 | 14 | 61 | 0.026 |
Sequence Alignments (This image is cropped. Click for full image.) |
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