| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si025266m |
| Family | CE8 |
| Protein Properties | Length: 318 Molecular Weight: 34758.4 Isoelectric Point: 8.7288 |
| Chromosome | Chromosome/Scaffold: 3 Start: 47900710 End: 47902062 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 22 | 149 | 6.3e-35 |
| AVVSNGGGNHYATINEALAAAPPPAAGAASARRYVIHVRSGTYDEIVNITRSDVTLIGDGMGRTIITGNRCNHTGHDMPHSATLSVGGTGFMARDLTTKN THRVDAGPAVALMITADRSICYRCEIDG | |||
| CE8 | 144 | 297 | 0 |
| RCEIDGTVDFIFGYAKAVFKQCNLLVRLPAARGHCVVTVQGRDAPDDHSGLVFQDSTVAALPGVNLAGVPTYLGRPWKNHSHVIFMNWFLEGIIHPAGWK RWGDNDHLDTIFYGEFQNWGDGANTQGRINWPGFHIIKDAAEAANFTVQRFIQG | |||
| Full Sequence |
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| Protein Sequence Length: 318 Download |
| MPRWVEPRLR RLVGTRRHKV DAVVSNGGGN HYATINEALA AAPPPAAGAA SARRYVIHVR 60 SGTYDEIVNI TRSDVTLIGD GMGRTIITGN RCNHTGHDMP HSATLSVGGT GFMARDLTTK 120 NTHRVDAGPA VALMITADRS ICYRCEIDGT VDFIFGYAKA VFKQCNLLVR LPAARGHCVV 180 TVQGRDAPDD HSGLVFQDST VAALPGVNLA GVPTYLGRPW KNHSHVIFMN WFLEGIIHPA 240 GWKRWGDNDH LDTIFYGEFQ NWGDGANTQG RINWPGFHII KDAAEAANFT VQRFIQGDEW 300 LPEFGVRSPK IPITSKV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 1.0e-77 | 1 | 306 | 335 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02916 | PLN02916 | 3.0e-79 | 19 | 306 | 317 | + pectinesterase family protein | ||
| PLN02201 | PLN02201 | 7.0e-80 | 2 | 307 | 339 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02506 | PLN02506 | 8.0e-83 | 20 | 307 | 315 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 7.0e-100 | 21 | 298 | 307 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA94334.1 | 0 | 1 | 302 | 28 | 361 | Pectinesterase family protein [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABK24761.1 | 0 | 1 | 306 | 222 | 549 | unknown [Picea sitchensis] |
| GenBank | EAY80256.1 | 0 | 3 | 304 | 42 | 370 | hypothetical protein OsI_35428 [Oryza sativa Indica Group] |
| GenBank | EAY81365.1 | 0 | 1 | 302 | 28 | 361 | hypothetical protein OsI_36536 [Oryza sativa Indica Group] |
| RefSeq | XP_002512462.1 | 0 | 1 | 307 | 209 | 528 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 21 | 306 | 4 | 309 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 21 | 301 | 8 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 0.00000000000004 | 19 | 220 | 30 | 269 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2nt9_B | 0.0000000003 | 21 | 302 | 5 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2nt9_A | 0.0000000003 | 21 | 302 | 5 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY801979 | 313 | 17 | 302 | 0 |
| EC939603 | 279 | 53 | 306 | 0 |
| DY829415 | 277 | 53 | 306 | 0 |
| EX334448 | 277 | 57 | 306 | 0 |
| EX334231 | 277 | 57 | 306 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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