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Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si025923m |
Family | GH116 |
Protein Properties | Length: 952 Molecular Weight: 106764 Isoelectric Point: 5.9235 |
Chromosome | Chromosome/Scaffold: 8 Start: 8954255 End: 8964102 |
Description | Beta-glucosidase, GBA2 type family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH116 | 530 | 891 | 0 |
GQFLYLEGIEYYMWNTYDVHFYASFSLVMLFPKLQISVQRDFAAAVMMHDPEKLRILHDGKWAARKVLGAVPHDLGLYDPWFKVNAYTLYNTDRWKDLNP KFVLQVYRDVVATGDKSFARAVWPSVYMAMAYMEQFDKDKDGMIENENFPDQTYDVWSMAGISAYCGGLWVAALQAASALAREVGDEASEKLFWDKYEKA KSVYSKLWNGSYFNYDDGDNKVSTSIQADQLAGQWYAKACGLFPIVDKDKAQSALEKIYSFNVMKFKDGTRGAMNGMWPDGTLDMSAMQSREIWPGVTYA LAATMIQEGMVEQGFKTAEGIYHAAWSPEGLGYSFQTPEAWNNDDEYRSLCYMRPLAIWAIQ |
Full Sequence |
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Protein Sequence Length: 952 Download |
MVENGTDEQP KGVSRNCPPA HMNGDEEKVY PGQLPVLTWE HKLTHVRHDL PSFRLTWRET 60 RQLAGIGLRL GRHILEETSK GRVSVIDPMK KRIAKSGQGV PLGGIGAGSI GRSYTGDFQR 120 WQLFPGTCED KPVLANQFSA FISHQDGRKY STVLHPGKPD LPKGSEISGI GSWDWNMSGQ 180 HSTYHALYPR AWTVYDGEPD PELNIVCRQI SPIIPHNYQQ SSYPAAVFTF TVTNSGHTAA 240 DVTLLFTWAN SVGGKSELTG YHSNSSMIEK DGVHGILLHH RTADGQPPVT FAIAAQEKED 300 IHISECPCFL ISGNSDGFTA KDMWNSVKEH GSFDHLDPIK TSMCSKPGSS IGAAIAASLK 360 IAPKATQDVS FSLAWACPEV KFSSGKTYHR RYTKFYGTDV DAAASLAHDA ILEHTTWERQ 420 IEDWQDPILQ DERFPAWYPV TLFNELYYLN AGGTIWTDGL PPIQSLTAIG GKKFSLDMLN 480 DDDVNEMIQQ NNTASDILHR MASILERMHA SIASNSAIGT TLLHGEENIG QFLYLEGIEY 540 YMWNTYDVHF YASFSLVMLF PKLQISVQRD FAAAVMMHDP EKLRILHDGK WAARKVLGAV 600 PHDLGLYDPW FKVNAYTLYN TDRWKDLNPK FVLQVYRDVV ATGDKSFARA VWPSVYMAMA 660 YMEQFDKDKD GMIENENFPD QTYDVWSMAG ISAYCGGLWV AALQAASALA REVGDEASEK 720 LFWDKYEKAK SVYSKLWNGS YFNYDDGDNK VSTSIQADQL AGQWYAKACG LFPIVDKDKA 780 QSALEKIYSF NVMKFKDGTR GAMNGMWPDG TLDMSAMQSR EIWPGVTYAL AATMIQEGMV 840 EQGFKTAEGI YHAAWSPEGL GYSFQTPEAW NNDDEYRSLC YMRPLAIWAI QWALSNPKLH 900 NTPQTDIAQD SFPKTQISYT RIAKLLQLPE DESSKSFVRV VYEIIQNRFW S* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG4354 | COG4354 | 8.0e-31 | 99 | 458 | 372 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
pfam12215 | GBA2_N | 9.0e-62 | 99 | 424 | 334 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
COG4354 | COG4354 | 5.0e-77 | 529 | 894 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
pfam04685 | DUF608 | 6.0e-170 | 530 | 892 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. |
Gene Ontology | |
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GO Term | Description |
GO:0004348 | glucosylceramidase activity |
GO:0006665 | sphingolipid metabolic process |
GO:0016021 | integral to membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX95400.1 | 0 | 82 | 951 | 26 | 931 | At5g49900 [Oryza sativa Japonica Group] |
GenBank | EEC67936.1 | 0 | 1 | 951 | 1 | 950 | hypothetical protein OsI_35656 [Oryza sativa Indica Group] |
RefSeq | NP_001067588.1 | 0 | 1 | 951 | 1 | 950 | Os11g0242100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002264575.1 | 0 | 1 | 950 | 1 | 948 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002450573.1 | 0 | 1 | 951 | 1 | 951 | hypothetical protein SORBIDRAFT_05g007160 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY292040 | 359 | 543 | 898 | 0 |
GR335547 | 268 | 435 | 700 | 0 |
CB622732 | 267 | 421 | 685 | 0 |
DT947783 | 265 | 630 | 894 | 0 |
FF354175 | 282 | 472 | 750 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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