Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si026003m |
Family | GH3 |
Protein Properties | Length: 788 Molecular Weight: 83104.6 Isoelectric Point: 5.6349 |
Chromosome | Chromosome/Scaffold: 8 Start: 15358997 End: 15362907 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 92 | 341 | 0 |
GVPRLGVPGYKWWNEALHGLATSGKGLHFDAVGGVRAATSFPQVLLTAAAFDDDLWLRIGQAIGREARALFNVGQAEGLTIWSPNVNIFRDPRWGRGQET PGEDPAVASRYAAAFVRGIQGNVSSLLQTSACCKHATAYDLENWNGVQRYSFVARVTAQDLEDTFNPPFRSCVADGGASCVMCAYTAVNGVPSCADAGLL TGTVRGDWGLDGYVASDCDAVAIMRDAQRYAASPEDAVAVSLKAGLDIDC |
Full Sequence |
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Protein Sequence Length: 788 Download |
MASSFSSSRN NTNGGDMATA LVPLILLATT LTAAVAAAGT TPPFSCGPSS AEASQGYAFC 60 DTTLGPAQRA ADLVSRLTPA EKVAQLGDVA PGVPRLGVPG YKWWNEALHG LATSGKGLHF 120 DAVGGVRAAT SFPQVLLTAA AFDDDLWLRI GQAIGREARA LFNVGQAEGL TIWSPNVNIF 180 RDPRWGRGQE TPGEDPAVAS RYAAAFVRGI QGNVSSLLQT SACCKHATAY DLENWNGVQR 240 YSFVARVTAQ DLEDTFNPPF RSCVADGGAS CVMCAYTAVN GVPSCADAGL LTGTVRGDWG 300 LDGYVASDCD AVAIMRDAQR YAASPEDAVA VSLKAGLDID CGSYVQQHAT ASIQQGKLTD 360 QDVDRALTNL FAVRMRLGHF DGDPRANGYG ALGAADICTP AHRSLALEAA QDGIVLLKND 420 GGILPLDRST VASAAAIGPN ADDGRALIAN YFGPPCESTT PLKGLQSYVG DVRFLAGCGT 480 AACDTAATDQ AAALAASADQ VFLFMGLSQQ QESEGKDRTS LLLPGMQQSL VTAVADAAKR 540 PVILVLLSGG PVDVTFAQSN PNIGAILWAG YPGQAGGLAI ARILFGDHNP SGRLPVTWYP 600 EEFTKIPMTD MRMRADPATG YPGRSYRFYQ GNTVYKFGYG LSYSSFSRKL VSGANMPAIP 660 TTVLAGLREM MAGEDGTSYH VDAIGADGCE QLKFPAAVEV QNHGPMDGKH SVLMFLRWSN 720 ATAGRPARQL TGFRSKHLKA GEKANLRFDV SPCEHFSRVR EDGKKVIDRG SHFLMVDDHE 780 MEITFEA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 3.0e-51 | 77 | 444 | 400 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-52 | 414 | 644 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 2.0e-62 | 89 | 373 | 289 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-74 | 120 | 752 | 676 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 44 | 787 | 758 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX92971.1 | 0 | 42 | 787 | 25 | 771 | beta-D-xylosidase [Oryza sativa Japonica Group] |
GenBank | EAY80660.1 | 0 | 42 | 787 | 25 | 771 | hypothetical protein OsI_35838 [Oryza sativa Indica Group] |
RefSeq | NP_001067726.1 | 0 | 42 | 787 | 35 | 782 | Os11g0297800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002489310.1 | 0 | 32 | 787 | 17 | 772 | hypothetical protein SORBIDRAFT_0010s010920 [Sorghum bicolor] |
RefSeq | XP_002489311.1 | 0 | 20 | 787 | 26 | 791 | hypothetical protein SORBIDRAFT_0010s012040 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 130 | 776 | 91 | 721 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3u48_A | 0 | 130 | 776 | 91 | 721 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3u4a_B | 0 | 130 | 776 | 91 | 721 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3u4a_A | 0 | 130 | 776 | 91 | 721 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 4i3g_B | 3e-31 | 69 | 443 | 53 | 403 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |