| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si026013m |
| Family | GH116 |
| Protein Properties | Length: 758 Molecular Weight: 84970.7 Isoelectric Point: 6.1458 |
| Chromosome | Chromosome/Scaffold: 8 Start: 8954255 End: 8962495 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH116 | 526 | 748 | 0 |
| GQFLYLEGIEYYMWNTYDVHFYASFSLVMLFPKLQISVQRDFAAAVMMHDPEKLRILHDGKWAARKVLGAVPHDLGLYDPWFKVNAYTLYNTDRWKDLNP KFVLQVYRDVVATGDKSFARAVWPSVYMAMAYMEQFDKDKDGMIENENFPDQTYDVWSMAGISAYCGGLWVAALQAASALAREVGDEASEKLFWDKYEKA KSVYSKLWNGSYFNYDDGDNKVR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 758 Download |
| MVENGTDEQP KGVSRNCPPA HMNGDEEKVY PGQLPVLTWE HKLTHVRHDL PSFRLTWRET 60 RQLAGIGLRL GRHILEETSK GRVSVIDPMK KRIAKSGQGV PLGGSIGRSY TGDFQRWQLF 120 PGTCEDKPVL ANQFSAFISH QDGRKYSTVL HPGKPDLPKG SEISGIGSWD WNMSGQHSTY 180 HALYPRAWTV YDGEPDPELN IVCRQISPII PHNYQQSSYP AAVFTFTVTN SGHTAADVTL 240 LFTWANSVGG KSELTGYHSN SSMIEKDGVH GILLHHRTAD GQPPVTFAIA AQEKEDIHIS 300 ECPCFLISGN SDGFTAKDMW NSVKEHGSFD HLDPIKTSMC SKPGSSIGAA IAASLKIAPK 360 ATQDVSFSLA WACPEVKFSS GKTYHRRYTK FYGTDVDAAA SLAHDAILEH TTWERQIEDW 420 QDPILQDERF PAWYPVTLFN ELYYLNAGGT IWTDGLPPIQ SLTAIGGKKF SLDMLNDDDV 480 NEMIQQNNTA SDILHRMASI LERMHASIAS NSAIGTTLLH GEENIGQFLY LEGIEYYMWN 540 TYDVHFYASF SLVMLFPKLQ ISVQRDFAAA VMMHDPEKLR ILHDGKWAAR KVLGAVPHDL 600 GLYDPWFKVN AYTLYNTDRW KDLNPKFVLQ VYRDVVATGD KSFARAVWPS VYMAMAYMEQ 660 FDKDKDGMIE NENFPDQTYD VWSMAGISAY CGGLWVAALQ AASALAREVG DEASEKLFWD 720 KYEKAKSVYS KLWNGSYFNY DDGDNKVRQS VWSLPNC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 9.0e-28 | 99 | 454 | 372 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 6.0e-45 | 525 | 747 | 239 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 8.0e-57 | 99 | 420 | 334 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| pfam04685 | DUF608 | 6.0e-92 | 526 | 753 | 232 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX95400.1 | 0 | 82 | 751 | 26 | 736 | At5g49900 [Oryza sativa Japonica Group] |
| GenBank | EEC67936.1 | 0 | 1 | 751 | 1 | 755 | hypothetical protein OsI_35656 [Oryza sativa Indica Group] |
| RefSeq | NP_001067588.1 | 0 | 1 | 751 | 1 | 755 | Os11g0242100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002450573.1 | 0 | 1 | 751 | 1 | 755 | hypothetical protein SORBIDRAFT_05g007160 [Sorghum bicolor] |
| RefSeq | XP_002528846.1 | 0 | 27 | 751 | 23 | 754 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| GR335547 | 268 | 431 | 696 | 0 |
| CB622732 | 267 | 417 | 681 | 0 |
| FF354175 | 282 | 468 | 746 | 0 |
| FL807760 | 233 | 104 | 336 | 0 |
| GD015461 | 242 | 81 | 318 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
