| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si026057m |
| Family | GH116 |
| Protein Properties | Length: 688 Molecular Weight: 77661.6 Isoelectric Point: 4.9167 |
| Chromosome | Chromosome/Scaffold: 8 Start: 8954255 End: 8960083 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH116 | 266 | 627 | 0 |
| GQFLYLEGIEYYMWNTYDVHFYASFSLVMLFPKLQISVQRDFAAAVMMHDPEKLRILHDGKWAARKVLGAVPHDLGLYDPWFKVNAYTLYNTDRWKDLNP KFVLQVYRDVVATGDKSFARAVWPSVYMAMAYMEQFDKDKDGMIENENFPDQTYDVWSMAGISAYCGGLWVAALQAASALAREVGDEASEKLFWDKYEKA KSVYSKLWNGSYFNYDDGDNKVSTSIQADQLAGQWYAKACGLFPIVDKDKAQSALEKIYSFNVMKFKDGTRGAMNGMWPDGTLDMSAMQSREIWPGVTYA LAATMIQEGMVEQGFKTAEGIYHAAWSPEGLGYSFQTPEAWNNDDEYRSLCYMRPLAIWAIQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 688 Download |
| MDDREKDGVH GILLHHRTAD GQPPVTFAIA AQEKEDIHIS ECPCFLISGN SDGFTAKDMW 60 NSVKEHGSFD HLDPIKTSMC SKPGSSIGAA IAASLKIAPK ATQDVSFSLA WACPEVKFSS 120 GKTYHRRYTK FYGTDVDAAA SLAHDAILEH TTWERQIEDW QDPILQDERF PAWYPVTLFN 180 ELYYLNAGGT IWTDGLPPIQ SLTAIGGKKF SLDMLNDDDV NEMIQQNNTA SDILHRMASI 240 LERMHASIAS NSAIGTTLLH GEENIGQFLY LEGIEYYMWN TYDVHFYASF SLVMLFPKLQ 300 ISVQRDFAAA VMMHDPEKLR ILHDGKWAAR KVLGAVPHDL GLYDPWFKVN AYTLYNTDRW 360 KDLNPKFVLQ VYRDVVATGD KSFARAVWPS VYMAMAYMEQ FDKDKDGMIE NENFPDQTYD 420 VWSMAGISAY CGGLWVAALQ AASALAREVG DEASEKLFWD KYEKAKSVYS KLWNGSYFNY 480 DDGDNKVSTS IQADQLAGQW YAKACGLFPI VDKDKAQSAL EKIYSFNVMK FKDGTRGAMN 540 GMWPDGTLDM SAMQSREIWP GVTYALAATM IQEGMVEQGF KTAEGIYHAA WSPEGLGYSF 600 QTPEAWNNDD EYRSLCYMRP LAIWAIQWAL SNPKLHNTPQ TDIAQDSFPK TQISYTRIAK 660 LLQLPEDESS KSFVRVVYEI IQNRFWS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 2.0e-8 | 102 | 194 | 94 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 7.0e-12 | 5 | 160 | 159 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-77 | 265 | 630 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 2.0e-170 | 266 | 628 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX95400.1 | 0 | 1 | 687 | 227 | 931 | At5g49900 [Oryza sativa Japonica Group] |
| GenBank | EEC67936.1 | 0 | 5 | 687 | 267 | 950 | hypothetical protein OsI_35656 [Oryza sativa Indica Group] |
| RefSeq | NP_001067588.1 | 0 | 5 | 687 | 267 | 950 | Os11g0242100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002275782.1 | 0 | 4 | 687 | 277 | 965 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002450573.1 | 0 | 5 | 687 | 265 | 951 | hypothetical protein SORBIDRAFT_05g007160 [Sorghum bicolor] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DY292040 | 355 | 279 | 630 | 0 |
| GR335547 | 268 | 171 | 436 | 0 |
| CB622732 | 267 | 157 | 421 | 0 |
| DT947783 | 265 | 366 | 630 | 0 |
| FF354175 | 282 | 208 | 486 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
