| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si026078m |
| Family | GH51 |
| Protein Properties | Length: 670 Molecular Weight: 74251.9 Isoelectric Point: 6.0403 |
| Chromosome | Chromosome/Scaffold: 8 Start: 8889583 End: 8898571 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 178 | 531 | 0 |
| NLASINLKVAGTSNWTKLEQKLVAKGTNRTSRLQITTHNKGVIWFDQVSLMPADTYKGHGFRSDLISMLLDLKPRFFRFPGGCFVEGEWLRNAFRWRESI GPWEERPGHFGDVWHYWTDDGLGYYEYLQLSEDLGAAPIWVFNNGISHHDEVDTAIIAPFVKDVLDGLEFAKGSANSTWGSVRAAMGHPEPFPLKYVAIG NEDCGKKHYRGNYLKFYNAIRDAYPDIQMISNCDGSSRRLDHPADLFDFHVYTDSKTLFSMMNEFDSTSRDGPKAFVSEYAVWKRDAGKGSLLASLAEAA FLTGLERNSDIVQMASYAPLFVNTNDRRWNPDAIVFNTWQHYGTPSYWMQTLFR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 670 Download |
| MGSMEGFSPT TIPCLLLLFC LGCKCLASEF ELTQTATVKV DATPELARKI PDTLFGVFFE 60 EINHAGAGGI WAELVSNRGF EAGGPHTPSN IHPWSIVGDD SSIFVATDRS SCFSRNIVAL 120 RMEVLCNDCP AGGVGIYNPG FWGMNIEDGK TYNLVMYVKS PETADLTVSL TSPDGLQNLA 180 SINLKVAGTS NWTKLEQKLV AKGTNRTSRL QITTHNKGVI WFDQVSLMPA DTYKGHGFRS 240 DLISMLLDLK PRFFRFPGGC FVEGEWLRNA FRWRESIGPW EERPGHFGDV WHYWTDDGLG 300 YYEYLQLSED LGAAPIWVFN NGISHHDEVD TAIIAPFVKD VLDGLEFAKG SANSTWGSVR 360 AAMGHPEPFP LKYVAIGNED CGKKHYRGNY LKFYNAIRDA YPDIQMISNC DGSSRRLDHP 420 ADLFDFHVYT DSKTLFSMMN EFDSTSRDGP KAFVSEYAVW KRDAGKGSLL ASLAEAAFLT 480 GLERNSDIVQ MASYAPLFVN TNDRRWNPDA IVFNTWQHYG TPSYWMQTLF RESSGAMVHP 540 ITINSRYSNS LAASAITWQD LGNSFLRVKI VNFGWHAVIV RIATTGLEAS VNAVGSAVTV 600 LTSDNVMDEN SFSHPEKVVP VKRQLRNAAE YMRVRLAPHS LTSFDLALSQ SKLISNVAEK 660 GDESLRSGL* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 3.0e-31 | 237 | 640 | 483 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 5.0e-33 | 455 | 640 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 7.0e-44 | 455 | 640 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK21880.1 | 0 | 1 | 657 | 1 | 656 | AF320325_1 arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II [Hordeum vulgare] |
| GenBank | ACN27961.1 | 0 | 11 | 657 | 10 | 656 | unknown [Zea mays] |
| GenBank | EEC67598.1 | 0 | 1 | 657 | 1 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| RefSeq | NP_001065660.1 | 0 | 1 | 657 | 1 | 658 | Os11g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442705.1 | 0 | 1 | 657 | 1 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 2e-19 | 237 | 497 | 48 | 327 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 2e-19 | 237 | 497 | 48 | 327 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 2e-19 | 237 | 497 | 48 | 327 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 2e-19 | 237 | 497 | 48 | 327 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 2e-19 | 237 | 497 | 48 | 327 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
