| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si026159m |
| Family | AA1 |
| Protein Properties | Length: 582 Molecular Weight: 64439.2 Isoelectric Point: 5.7774 |
| Chromosome | Chromosome/Scaffold: 8 Start: 36349646 End: 36352285 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 2 | 554 | 0 |
| THLCKETLVTVVNGQLPGPAIEVTEGDSVTVHVVNKSPYNITIHWHGVKQWLNCWADGVPMITQLPIQPNQNFTYRFNVIGQEGTLWWHAHVPFLRASLH GALIIRPRNGASSYPFPKPDREVPIIIADYWQLDLAQAARRMMHGFLFSFANASTINGKLGDIFNCSGVPEDNYVLDVVPGKTYLLRIINAALFAEFYLK IAGHKFTVVGADASYVSPYTTDVIAIAPGETVDALVVADAPPGRYYMVALPNQAPLPDTQTPEYTTRGIMQYSNTHSSADDPAGLISDRGVEEEEEDKGS SGDVPVAPEMPDIHDTITSYYFHSNLTNLYQTVVPQRVDERLFIVLSLGSICQHGQSCRRGDHNETILIATMNNVSFQDPTGKTPLLEAHYYHTGSVDLM QELPDRPPRAFNFTDEALIPYGPKEMRLEPSYKATVVRRFRHGAVVEMVFQSTAVLQGDSNPMHLHGHNMILLAQGFGNFDAAKDVAKYNLVNPPVKNTI LVPNLGWAAIRFVANNPGVWFIHCHYEFHLTMGMAAVFIVEDGPTVDTSLPPP | |||
| Full Sequence |
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| Protein Sequence Length: 582 Download |
| MTHLCKETLV TVVNGQLPGP AIEVTEGDSV TVHVVNKSPY NITIHWHGVK QWLNCWADGV 60 PMITQLPIQP NQNFTYRFNV IGQEGTLWWH AHVPFLRASL HGALIIRPRN GASSYPFPKP 120 DREVPIIIAD YWQLDLAQAA RRMMHGFLFS FANASTINGK LGDIFNCSGV PEDNYVLDVV 180 PGKTYLLRII NAALFAEFYL KIAGHKFTVV GADASYVSPY TTDVIAIAPG ETVDALVVAD 240 APPGRYYMVA LPNQAPLPDT QTPEYTTRGI MQYSNTHSSA DDPAGLISDR GVEEEEEDKG 300 SSGDVPVAPE MPDIHDTITS YYFHSNLTNL YQTVVPQRVD ERLFIVLSLG SICQHGQSCR 360 RGDHNETILI ATMNNVSFQD PTGKTPLLEA HYYHTGSVDL MQELPDRPPR AFNFTDEALI 420 PYGPKEMRLE PSYKATVVRR FRHGAVVEMV FQSTAVLQGD SNPMHLHGHN MILLAQGFGN 480 FDAAKDVAKY NLVNPPVKNT ILVPNLGWAA IRFVANNPGV WFIHCHYEFH LTMGMAAVFI 540 VEDGPTVDTS LPPPPAHFPT YCGHDDNLLP DELCLQTKKD A* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 1.0e-46 | 2 | 111 | 112 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03390 | ascorbOXfungal | 2.0e-48 | 5 | 543 | 577 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02191 | PLN02191 | 6.0e-71 | 5 | 540 | 568 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 3.0e-82 | 5 | 539 | 561 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 2 | 560 | 565 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001064399.1 | 0 | 1 | 558 | 52 | 599 | Os10g0346300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130676.1 | 0 | 1 | 544 | 40 | 578 | hypothetical protein LOC100191779 [Zea mays] |
| RefSeq | NP_001146681.1 | 0 | 1 | 544 | 52 | 585 | hypothetical protein LOC100280281 [Zea mays] |
| RefSeq | XP_002449982.1 | 0 | 1 | 544 | 43 | 581 | hypothetical protein SORBIDRAFT_05g026630 [Sorghum bicolor] |
| RefSeq | XP_002457562.1 | 0 | 1 | 564 | 42 | 595 | hypothetical protein SORBIDRAFT_03g009410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 5 | 539 | 19 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1asq_A | 0 | 5 | 539 | 19 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1asp_B | 0 | 5 | 539 | 19 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1asp_A | 0 | 5 | 539 | 19 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1aso_B | 0 | 5 | 539 | 19 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JK593019 | 250 | 303 | 548 | 0 |
| EG387254 | 243 | 1 | 243 | 0 |
| HX190751 | 244 | 1 | 244 | 0 |
| DV532531 | 224 | 1 | 223 | 0 |
| DR796293 | 214 | 1 | 213 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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