Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si026174m |
Family | CE8 |
Protein Properties | Length: 563 Molecular Weight: 57834.9 Isoelectric Point: 8.6156 |
Chromosome | Chromosome/Scaffold: 8 Start: 8188037 End: 8190297 |
Description | pectin methylesterase 61 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 250 | 546 | 0 |
AVVALDGSGTHRTINEAIAAVTAAKGGGGGGGGRKVIHVKAGRYEESVSISSKQKNVMLMGDGKGKTVIAGHKSAADGYTTYATATVAAMGSGFIAKGLT IINSAGPGKGQAVALRVGGDLSVVYQCAIQAYQDTLYVHSNRQFYAEDDIAGTVDFIFGNSAVVIQNCDIQARRPSPGQKDTVTAQGRTDPNQNTGISIH KCRITGASDLGSTSVYLGRPWQKYSRTVVMESFLDSSISPAGWLEWSGQFALSTLYYGEYGNTGPGAGTSNRVTWTGVHTSLSRSDATRFTVANFIM |
Full Sequence |
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Protein Sequence Length: 563 Download |
MRGLRPWSRN IAAVLLALAT VVSATAAGKK DEAVVARGNY NVAVVDVSRI TISAAAAPSS 60 MNVSAICQST PYPSACETAL SSPGPARDDP FAASVQFAMA RAASARTLAR NVSGASRSTP 120 HRGAPPSGVM DCAELLDISV AQLGDALAAA AGDADGATTW LSAALTNQGT CADSLAAEPD 180 PAGRDAVRAR ISALTQFIAT ALALHASKLK PDASGGPPPT PPVTTTFPSW VSQHDRKLLR 240 SPVDSVAIDA VVALDGSGTH RTINEAIAAV TAAKGGGGGG GGRKVIHVKA GRYEESVSIS 300 SKQKNVMLMG DGKGKTVIAG HKSAADGYTT YATATVAAMG SGFIAKGLTI INSAGPGKGQ 360 AVALRVGGDL SVVYQCAIQA YQDTLYVHSN RQFYAEDDIA GTVDFIFGNS AVVIQNCDIQ 420 ARRPSPGQKD TVTAQGRTDP NQNTGISIHK CRITGASDLG STSVYLGRPW QKYSRTVVME 480 SFLDSSISPA GWLEWSGQFA LSTLYYGEYG NTGPGAGTSN RVTWTGVHTS LSRSDATRFT 540 VANFIMGDSW LGGTGVAYDS GL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 3.0e-138 | 159 | 562 | 430 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-143 | 127 | 562 | 444 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 1.0e-144 | 131 | 562 | 448 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02170 | PLN02170 | 8.0e-161 | 44 | 562 | 523 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-164 | 249 | 548 | 304 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD19539.1 | 0 | 10 | 562 | 17 | 571 | putative pectinesterase [Oryza sativa Japonica Group] |
RefSeq | NP_001048322.1 | 0 | 10 | 562 | 27 | 581 | Os02g0783000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148248.1 | 0 | 47 | 562 | 59 | 578 | pectinesterase-2 [Zea mays] |
RefSeq | XP_002449226.1 | 0 | 14 | 547 | 6 | 569 | hypothetical protein SORBIDRAFT_05g006610 [Sorghum bicolor] |
RefSeq | XP_002454668.1 | 0 | 59 | 562 | 53 | 575 | hypothetical protein SORBIDRAFT_04g035200 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 245 | 562 | 4 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 249 | 562 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-19 | 259 | 519 | 17 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-19 | 259 | 519 | 17 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-19 | 259 | 519 | 17 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |