Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si027422m |
Family | GT34 |
Protein Properties | Length: 498 Molecular Weight: 56206.8 Isoelectric Point: 9.9484 |
Chromosome | Chromosome/Scaffold: 8 Start: 2078265 End: 2079758 |
Description | Galactosyl transferase GMA12/MNN10 family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT34 | 146 | 384 | 0 |
NPRVLLVTASPPGPCDDPAGDHFLLRATKNKIDYCRLHGIELAHITARLDGELTGGWAKLPLLRRLMLAHPEVEWLWWVDGDALVTDMGFELPLARYEGA HLVVHGNSYLLFQLRSWVAVSTGSFLIRNCQWSLELLDAWAVMGSRGRARNDAGKLLTATLHGRPAFEADDQSALIHLLITEKERWMEKVYLENEYYLHG HWSGLVDRYEQAMEKHHPGYGDDRWPFVTHFVGCKPCGG |
Full Sequence |
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Protein Sequence Length: 498 Download |
MRTPAGGGWL LQPRGSSSKL TQRAINNIRF TLLCAFVTFL VLRGTVGVNR RLVYIAGSDR 60 APPGAKATED IERILREIRA DSDPDPEPND DGNTSPSTRA TRYYDRGSAW STANYSLGPR 120 VTRWNARRRR WLHLNPGFPS RDARGNPRVL LVTASPPGPC DDPAGDHFLL RATKNKIDYC 180 RLHGIELAHI TARLDGELTG GWAKLPLLRR LMLAHPEVEW LWWVDGDALV TDMGFELPLA 240 RYEGAHLVVH GNSYLLFQLR SWVAVSTGSF LIRNCQWSLE LLDAWAVMGS RGRARNDAGK 300 LLTATLHGRP AFEADDQSAL IHLLITEKER WMEKVYLENE YYLHGHWSGL VDRYEQAMEK 360 HHPGYGDDRW PFVTHFVGCK PCGGGVGRSI RSGGNSSDEY PLDRCVRGME RAFNFADNQV 420 LRLYGFRHES LASAEVRRVT NRSANPLEAK EEAISFLKKS KDPDVKSHDV RRNRKRKGKR 480 DSVLERILKR LGWTPGI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK13952 | mscL | 0.007 | 28 | 79 | 52 | + large-conductance mechanosensitive channel; Provisional | ||
pfam05637 | Glyco_transf_34 | 1.0e-64 | 145 | 382 | 265 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
PLN03181 | PLN03181 | 1.0e-109 | 77 | 431 | 389 | + glycosyltransferase; Provisional | ||
PLN03182 | PLN03182 | 0 | 11 | 461 | 458 | + xyloglucan 6-xylosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY82266.1 | 0 | 1 | 459 | 1 | 460 | hypothetical protein OsI_37474 [Oryza sativa Indica Group] |
RefSeq | NP_001066160.1 | 0 | 1 | 459 | 1 | 460 | Os12g0149300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105849.1 | 0 | 12 | 451 | 29 | 466 | putative glycosyltransferase [Zea mays] |
RefSeq | XP_002441834.1 | 0 | 1 | 497 | 1 | 515 | hypothetical protein SORBIDRAFT_08g003080 [Sorghum bicolor] |
RefSeq | XP_002442801.1 | 0 | 5 | 459 | 4 | 461 | hypothetical protein SORBIDRAFT_08g003090 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EV241557 | 305 | 148 | 452 | 0 |
DR931373 | 293 | 156 | 448 | 0 |
DR944115 | 287 | 162 | 448 | 0 |
EX126465 | 289 | 159 | 447 | 0 |
DV979949 | 316 | 115 | 430 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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