| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si027450m |
| Family | GH3 |
| Protein Properties | Length: 785 Molecular Weight: 83165 Isoelectric Point: 9.4858 |
| Chromosome | Chromosome/Scaffold: 8 Start: 15432312 End: 15435811 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH3 | 85 | 340 | 0 |
| GVPRLGVPGYKWWNEALHGVAISGKGIHLDQGAVRAATSFPQVLLTAAAFNDNLWFRIGQATGKEARALYNIGQAEGLTMWSPNVNIFRDPRWGRGQETP GEDPAVASRYAAAFVRGLQGSASNTRAAPPAVLQTSACCKHATAYDLEDWKGVSRYSFKATVTAQDLADTFNPPFQSCVVDGKASCVMCAYTSVNGVPSC ANADLLTKTFRSSWGLNGYVAADCDAVAIMKASQFYRPTAEDTVAATLKAGLDIDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 785 Download |
| MAASSSSIHN RNPGMATLLA ALGHLVFVPA LAAAGAPPFS CGPSSPSKGL PFCNTKLPAA 60 QRAADLVSRM TPAEKASQLG DIAPGVPRLG VPGYKWWNEA LHGVAISGKG IHLDQGAVRA 120 ATSFPQVLLT AAAFNDNLWF RIGQATGKEA RALYNIGQAE GLTMWSPNVN IFRDPRWGRG 180 QETPGEDPAV ASRYAAAFVR GLQGSASNTR AAPPAVLQTS ACCKHATAYD LEDWKGVSRY 240 SFKATVTAQD LADTFNPPFQ SCVVDGKASC VMCAYTSVNG VPSCANADLL TKTFRSSWGL 300 NGYVAADCDA VAIMKASQFY RPTAEDTVAA TLKAGLDIDC GPYIQQYVTS AIQKGKLTQQ 360 DVDKAVKNLF TTRMRLGHFD GDPKAGVYGS LGAAHICTAE HKNLALEAAL DGIVLLKNGA 420 GVLPLKRGAV ASAAVIGHNA NDVLALLGNY WGPPCAPTTP LQGIQGYVKN VKFLAGCNSA 480 ACNAAATQQA AALASSSDAV ILFMGLSQTQ ESEGKDRTSL LLPGNQQSLI TAVANAAKRP 540 VILVLLSGGP VDITFAQSNP KIGAILWAGY PGQAGGLAIA KVLFGEKNPS GKLPVTWYPE 600 EFTKIPMTDM RMRAAGGYPG RSYRFYNGKT VYKFGYGLSY SMFSQRPVTG RKNPAYNTSL 660 VAAAGLTATT EDRASYYVDA IGDEVCEQLK FPAVVKVRNQ GPMDGKHTVL VFLRWPNATD 720 GRPARQLVGF QGQHLKVGEK ANLRFELSPC EHFSRVRRDG RKVIDKGSHF LKVGRHEVEI 780 SFGA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 3.0e-46 | 83 | 442 | 367 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 7.0e-54 | 413 | 641 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-58 | 83 | 369 | 290 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 2.0e-64 | 122 | 749 | 674 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 15 | 782 | 782 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX96800.1 | 0 | 37 | 782 | 109 | 851 | Glycosyl hydrolase family 3 C terminal domain, putative [Oryza sativa Japonica Group] |
| RefSeq | NP_001067726.1 | 0 | 37 | 784 | 35 | 782 | Os11g0297800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002489304.1 | 0 | 32 | 784 | 12 | 750 | hypothetical protein SORBIDRAFT_0010s007570 [Sorghum bicolor] |
| RefSeq | XP_002489310.1 | 0 | 30 | 784 | 19 | 772 | hypothetical protein SORBIDRAFT_0010s010920 [Sorghum bicolor] |
| RefSeq | XP_002489311.1 | 0 | 5 | 784 | 14 | 791 | hypothetical protein SORBIDRAFT_0010s012040 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 165 | 774 | 128 | 722 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3u48_A | 0 | 165 | 774 | 128 | 722 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3u4a_B | 0 | 165 | 774 | 128 | 722 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3u4a_A | 0 | 165 | 774 | 128 | 722 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 2x41_A | 8e-35 | 121 | 774 | 78 | 699 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
