Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si027545m |
Family | AA1 |
Protein Properties | Length: 587 Molecular Weight: 63691 Isoelectric Point: 6.451 |
Chromosome | Chromosome/Scaffold: 8 Start: 1035452 End: 1039312 |
Description | laccase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 42 | 572 | 0 |
EQYHEFVIQEASVTRLCREHSIMTVNGQFPGPALEIDEGDSLIVRVINRGRYNMTVHWHGVRQMRTGWSDGPEYVTQCPIRPGQSYTYRFTVAGQEGTLW WHAHSSWLRATVHGALIIRPRAGVTAYPFDAAGKPPAREIPILLGEWWDMNPIDVVRTATRTGAAPNISDALTVNGQPGDLYRCSSKDTTTFPVKSGETN LLRFINAALNTELFVSLAGHTMTVVGTDASYTKPYSTSVLMIAPGQTTDVLVTFDQPPGRYYLAARAYASAQGVPFDNTTTTAIFDYSSSSSSGSSSPAM PTLPAYNDTATATTFTTNLRGLRKAELPSRVDENLFFTVGVGLFNCSRGQTCGGPNNTRFAASMNNVSFVLPSTVSILQAHYGGAQQGVFTADFPANPPV QFDYTAQNVSRALWQPAPGTKVYRLKYGAAVQLVLQGTNIFAGENHPIHIHGYDFYILAEGFGNFDAATDTAKFNLDDPPMRNTVGVPVNGWAVIRFVAD NPGVWLMHCHLDVHITWGLAMAFLVEDGVGE |
Full Sequence |
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Protein Sequence Length: 587 Download |
MRASGGMSSS SSMPFCSSSL LLITLPLLLW SSLTIQPAIA KEQYHEFVIQ EASVTRLCRE 60 HSIMTVNGQF PGPALEIDEG DSLIVRVINR GRYNMTVHWH GVRQMRTGWS DGPEYVTQCP 120 IRPGQSYTYR FTVAGQEGTL WWHAHSSWLR ATVHGALIIR PRAGVTAYPF DAAGKPPARE 180 IPILLGEWWD MNPIDVVRTA TRTGAAPNIS DALTVNGQPG DLYRCSSKDT TTFPVKSGET 240 NLLRFINAAL NTELFVSLAG HTMTVVGTDA SYTKPYSTSV LMIAPGQTTD VLVTFDQPPG 300 RYYLAARAYA SAQGVPFDNT TTTAIFDYSS SSSSGSSSPA MPTLPAYNDT ATATTFTTNL 360 RGLRKAELPS RVDENLFFTV GVGLFNCSRG QTCGGPNNTR FAASMNNVSF VLPSTVSILQ 420 AHYGGAQQGV FTADFPANPP VQFDYTAQNV SRALWQPAPG TKVYRLKYGA AVQLVLQGTN 480 IFAGENHPIH IHGYDFYILA EGFGNFDAAT DTAKFNLDDP PMRNTVGVPV NGWAVIRFVA 540 DNPGVWLMHC HLDVHITWGL AMAFLVEDGV GELQSLEAPP PDLPLC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 5.0e-53 | 48 | 164 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 3.0e-64 | 58 | 564 | 544 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-68 | 58 | 575 | 558 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-79 | 58 | 570 | 555 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 40 | 586 | 551 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF27393.2 | 0 | 64 | 586 | 1 | 522 | Os11g0108700 [Oryza sativa Japonica Group] |
GenBank | EEE52618.1 | 0 | 41 | 586 | 23 | 524 | hypothetical protein OsJ_34955 [Oryza sativa Japonica Group] |
RefSeq | NP_001065548.1 | 0 | 41 | 586 | 23 | 567 | Os11g0108700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001065948.1 | 0 | 41 | 586 | 23 | 567 | Os12g0108000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448873.1 | 0 | 39 | 586 | 37 | 587 | hypothetical protein SORBIDRAFT_05g000680 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 58 | 564 | 19 | 521 | A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate |
PDB | 1asq_A | 0 | 58 | 564 | 19 | 521 | A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate |
PDB | 1asp_B | 0 | 58 | 564 | 19 | 521 | A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate |
PDB | 1asp_A | 0 | 58 | 564 | 19 | 521 | A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate |
PDB | 1aso_B | 0 | 58 | 564 | 19 | 521 | A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate |