Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si027576m |
Family | GT34 |
Protein Properties | Length: 325 Molecular Weight: 36391.1 Isoelectric Point: 7.9314 |
Chromosome | Chromosome/Scaffold: 8 Start: 28145633 End: 28146753 |
Description | Galactosyl transferase GMA12/MNN10 family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT34 | 3 | 268 | 0 |
GGDHALLRFLKNKLDYCRLHGLELLYNTALLEPSMVAYWAKIPAVRAAMLAHPDAEWVWWVDADAVFTDMDFSLPLERYGGHDLVVYGWDGEVYEERSWV GLNAGVFLIRNCQWSMDLMDAWARMGPAFPEYAAWGKTLREELEGKPNDESDDQSALVYLLSKHPARWGNRTLLETGYYFQGYWAEIVDRLDGVAKRYEA VERGGRGGSSGLRRRHAEREHLRYAAARDAAVGRSGTVPGPAGGGQKGWRRPFVTHFTGCQPCGGA |
Full Sequence |
---|
Protein Sequence Length: 325 Download |
GAGGDHALLR FLKNKLDYCR LHGLELLYNT ALLEPSMVAY WAKIPAVRAA MLAHPDAEWV 60 WWVDADAVFT DMDFSLPLER YGGHDLVVYG WDGEVYEERS WVGLNAGVFL IRNCQWSMDL 120 MDAWARMGPA FPEYAAWGKT LREELEGKPN DESDDQSALV YLLSKHPARW GNRTLLETGY 180 YFQGYWAEIV DRLDGVAKRY EAVERGGRGG SSGLRRRHAE REHLRYAAAR DAAVGRSGTV 240 PGPAGGGQKG WRRPFVTHFT GCQPCGGAPD RKYTRRRCAE GIRRALAFAD DQVLRAYGFR 300 HAAPLSDSVV PLPFDYPAAA RIKH* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05637 | Glyco_transf_34 | 9.0e-58 | 4 | 177 | 198 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
PLN03182 | PLN03182 | 4.0e-126 | 4 | 311 | 308 | + xyloglucan 6-xylosyltransferase; Provisional | ||
PLN03181 | PLN03181 | 0 | 1 | 320 | 321 | + glycosyltransferase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY81250.1 | 0 | 1 | 319 | 166 | 482 | hypothetical protein OsI_36429 [Oryza sativa Indica Group] |
RefSeq | NP_001068066.1 | 0 | 1 | 319 | 166 | 482 | Os11g0546500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152534.1 | 0 | 1 | 319 | 148 | 472 | glycosyltransferase 6 [Zea mays] |
RefSeq | XP_002449648.1 | 0 | 1 | 324 | 130 | 449 | hypothetical protein SORBIDRAFT_05g020910 [Sorghum bicolor] |
RefSeq | XP_002450906.1 | 0 | 1 | 319 | 120 | 442 | hypothetical protein SORBIDRAFT_05g020930 [Sorghum bicolor] |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EC875456 | 206 | 1 | 204 | 0 |
DV507967 | 206 | 1 | 204 | 0 |
EE157588 | 206 | 1 | 204 | 0 |
DR826165 | 206 | 1 | 204 | 0 |
DR805912 | 206 | 1 | 204 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|