Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si028122m |
Family | GH17 |
Protein Properties | Length: 351 Molecular Weight: 37024.2 Isoelectric Point: 6.1344 |
Chromosome | Chromosome/Scaffold: 8 Start: 11503371 End: 11504566 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 30 | 332 | 0 |
IGVCYGMSGSDLPPASTVISMYKSNGIKAIRIYAPDKAALQALAGTNIRVLVGAPNDVLSNLTDAKAAAAWVRDNIEAYPSVSFGYIAVGNEVAGKAADL LAPAMENVHSALDAAGLGHIKVTTSVSQAIVVFNKPSGGNFTKEAQGFMGPVLKFLARTGAPLMANIYPYFTYAYNTAGMDVDYALFTAPGTVVKDGKYN YQNLFDATVDAFYEAMAKLGVSDVPVLVSETGWPSGGGKAATPENAKIYNQNLIEHIRKGTPRHPEPIKTYVFSMFNENQKDKGVEQNWGLFYPNMKPVY AIS |
Full Sequence |
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Protein Sequence Length: 351 Download |
MARQGAASSM FAMALLLGII ASIPQSVDSI GVCYGMSGSD LPPASTVISM YKSNGIKAIR 60 IYAPDKAALQ ALAGTNIRVL VGAPNDVLSN LTDAKAAAAW VRDNIEAYPS VSFGYIAVGN 120 EVAGKAADLL APAMENVHSA LDAAGLGHIK VTTSVSQAIV VFNKPSGGNF TKEAQGFMGP 180 VLKFLARTGA PLMANIYPYF TYAYNTAGMD VDYALFTAPG TVVKDGKYNY QNLFDATVDA 240 FYEAMAKLGV SDVPVLVSET GWPSGGGKAA TPENAKIYNQ NLIEHIRKGT PRHPEPIKTY 300 VFSMFNENQK DKGVEQNWGL FYPNMKPVYA ISLSTSAAPA PAPSPDSVEE * 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-10 | 59 | 324 | 281 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-129 | 30 | 329 | 307 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PRF/SEQDB | 0 | 1 | 333 | 1 | 334 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
GenBank | AAK16694.1 | 0 | 1 | 333 | 1 | 334 | AF323610_1 glucanase [Oryza sativa] |
GenBank | ACG36462.1 | 0 | 2 | 333 | 3 | 336 | lichenase-2 precursor [Zea mays] |
RefSeq | NP_001055377.1 | 0 | 1 | 333 | 1 | 334 | Os05g0375400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148461.1 | 0 | 2 | 333 | 3 | 336 | lichenase-2 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 30 | 333 | 1 | 306 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 1aq0_B | 0 | 30 | 333 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 30 | 333 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 30 | 333 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 30 | 334 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |