| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si028854m |
| Family | GH116 |
| Protein Properties | Length: 928 Molecular Weight: 104164 Isoelectric Point: 6.7409 |
| Chromosome | Chromosome/Scaffold: 2 Start: 12327607 End: 12336204 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH116 | 511 | 873 | 0 |
| GKFLYLEGIEYFMWCTYDVHFYASFALLDLFPKIELSIQRDFARAVLREDNSRVRFLADGTWGIRKVIGAVAHDLGAHDPWHELNAYNIHDTSRWKDLNP KFVLQIYRDFSATGDMSFGKDVWPAVCTAMEYMEQFDHDGDGMIENDGFPDQTYDAWTVQGVSAYCGCLWLAALQAAAALARSLGHVDYAERCMIRFAKA KSVFEARLWNGSYFNYDSGTSYSSRSIQADQLAGQWYTASSGLPPLFDEDRIKCTLQKIFDYNVMRVKGGRMGAVNGMHPNGKVDETCMQSREIWTGVTY SLAATMLLHGMEHQAFTTAEGIYIAGWSEEGYGYWFQTPEAWTVDGHYRSLIYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 928 Download |
| MPSGNLLSRR KRSWRANEFV SRSTLQLLDF DDGSPPEHAW RRKLSSHANR LKEFNVTFRE 60 AIRMMKLGLR LWSYIREEAS HGRKAPIDPF TRESNKPSAS QGVPLGGMGT GSISRGFRGE 120 FKHWQITPGY CEMSPVMANQ FSIFVARGGN KKYASVLAPG QLDGLKKSSD DGISSWDWKL 180 KGDRSTYHAL FPRAWTVYDG EPDPELKVSC RQISPFIPHN YQESSLPTSV FVYTLVNTGK 240 ERAKVSLLMT WANSIGGLSH HTGGHVNEPF IGENGVSGVL LHHKTANNNP PVTFAIAACE 300 NQNVNVTVLP VFGLSGESSV TAREMWGTMV QDGSFDRDNF NAGASMPSSL GDTVCAAVSA 360 STWVEPHGRC TVVFALAWSS PKVKFKKGST YYRRYTKFYG TSPRSAVNLV QDALMKYKYW 420 EEAIDKWQTP ILSDERLPEW YKITLFNELY FLVAGGTVWI DSESLVVDAD NKSNSSLLED 480 SDSSLRDSSC NSTVPLIGFD PHEIDDKENV GKFLYLEGIE YFMWCTYDVH FYASFALLDL 540 FPKIELSIQR DFARAVLRED NSRVRFLADG TWGIRKVIGA VAHDLGAHDP WHELNAYNIH 600 DTSRWKDLNP KFVLQIYRDF SATGDMSFGK DVWPAVCTAM EYMEQFDHDG DGMIENDGFP 660 DQTYDAWTVQ GVSAYCGCLW LAALQAAAAL ARSLGHVDYA ERCMIRFAKA KSVFEARLWN 720 GSYFNYDSGT SYSSRSIQAD QLAGQWYTAS SGLPPLFDED RIKCTLQKIF DYNVMRVKGG 780 RMGAVNGMHP NGKVDETCMQ SREIWTGVTY SLAATMLLHG MEHQAFTTAE GIYIAGWSEE 840 GYGYWFQTPE AWTVDGHYRS LIYMRPLAIW AMQCALSPPK SILEAPKVNT MDRAHMSPGT 900 LQFLQDSVRK ITPKNGCFGN TVFNWDC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.0008 | 597 | 743 | 169 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-64 | 102 | 420 | 327 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-103 | 102 | 876 | 803 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 2.0e-155 | 511 | 873 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL31035.1 | 0 | 1 | 927 | 1 | 967 | AC078948_19 unknown protein [Oryza sativa Japonica Group] |
| GenBank | EEC67156.1 | 0 | 1 | 927 | 1 | 974 | hypothetical protein OsI_34005 [Oryza sativa Indica Group] |
| GenBank | EEE67087.1 | 0 | 1 | 927 | 1 | 838 | hypothetical protein OsJ_24071 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064833.1 | 0 | 1 | 927 | 1 | 974 | Os10g0473400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002518119.1 | 0 | 1 | 927 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT051521 | 332 | 563 | 894 | 0 |
| GT032792 | 325 | 563 | 887 | 0 |
| GT051618 | 330 | 590 | 918 | 0 |
| JG911986 | 282 | 560 | 841 | 0 |
| GT045992 | 338 | 577 | 913 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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