| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si028945m |
| Family | GH116 |
| Protein Properties | Length: 821 Molecular Weight: 91860.6 Isoelectric Point: 5.9619 |
| Chromosome | Chromosome/Scaffold: 2 Start: 12327607 End: 12337034 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 404 | 766 | 0 |
| GKFLYLEGIEYFMWCTYDVHFYASFALLDLFPKIELSIQRDFARAVLREDNSRVRFLADGTWGIRKVIGAVAHDLGAHDPWHELNAYNIHDTSRWKDLNP KFVLQIYRDFSATGDMSFGKDVWPAVCTAMEYMEQFDHDGDGMIENDGFPDQTYDAWTVQGVSAYCGCLWLAALQAAAALARSLGHVDYAERCMIRFAKA KSVFEARLWNGSYFNYDSGTSYSSRSIQADQLAGQWYTASSGLPPLFDEDRIKCTLQKIFDYNVMRVKGGRMGAVNGMHPNGKVDETCMQSREIWTGVTY SLAATMLLHGMEHQAFTTAEGIYIAGWSEEGYGYWFQTPEAWTVDGHYRSLIYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 821 Download |
| MGTGSISRGF RGEFKHWQIT PGYCEMSPVM ANQFSIFVAR GGNKKYASVL APGQLDGLKK 60 SSDDGISSWD WKLKGDRSTY HALFPRAWTV YDGEPDPELK VSCRQISPFI PHNYQESSLP 120 TSVFVYTLVN TGKERAKVSL LMTWANSIGG LSHHTGGHVN EPFIGENGVS GVLLHHKTAN 180 NNPPVTFAIA ACENQNVNVT VLPVFGLSGE SSVTAREMWG TMVQDGSFDR DNFNAGASMP 240 SSLGDTVCAA VSASTWVEPH GRCTVVFALA WSSPKVKFKK GSTYYRRYTK FYGTSPRSAV 300 NLVQDALMKY KYWEEAIDKW QTPILSDERL PEWYKITLFN ELYFLVAGGT VWIDSESLVV 360 DADNKSNSSL LEDSDSSLRD SSCNSTVPLI GFDPHEIDDK ENVGKFLYLE GIEYFMWCTY 420 DVHFYASFAL LDLFPKIELS IQRDFARAVL REDNSRVRFL ADGTWGIRKV IGAVAHDLGA 480 HDPWHELNAY NIHDTSRWKD LNPKFVLQIY RDFSATGDMS FGKDVWPAVC TAMEYMEQFD 540 HDGDGMIEND GFPDQTYDAW TVQGVSAYCG CLWLAALQAA AALARSLGHV DYAERCMIRF 600 AKAKSVFEAR LWNGSYFNYD SGTSYSSRSI QADQLAGQWY TASSGLPPLF DEDRIKCTLQ 660 KIFDYNVMRV KGGRMGAVNG MHPNGKVDET CMQSREIWTG VTYSLAATML LHGMEHQAFT 720 TAEGIYIAGW SEEGYGYWFQ TPEAWTVDGH YRSLIYMRPL AIWAMQCALS PPKSILEAPK 780 VNTMDRAHMS PGTLQFLQDS VRKITPKNGC FGNTVFNWDC * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.0005 | 490 | 636 | 169 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 4.0e-59 | 1 | 313 | 321 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-98 | 2 | 769 | 796 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 8.0e-156 | 404 | 766 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL31035.1 | 0 | 1 | 820 | 108 | 967 | AC078948_19 unknown protein [Oryza sativa Japonica Group] |
| GenBank | EEC67156.1 | 0 | 1 | 820 | 108 | 974 | hypothetical protein OsI_34005 [Oryza sativa Indica Group] |
| GenBank | EEC81952.1 | 0 | 40 | 820 | 84 | 850 | hypothetical protein OsI_25831 [Oryza sativa Indica Group] |
| GenBank | EEE67087.1 | 0 | 40 | 820 | 84 | 838 | hypothetical protein OsJ_24071 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064833.1 | 0 | 1 | 820 | 108 | 974 | Os10g0473400 [Oryza sativa (japonica cultivar-group)] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT051521 | 331 | 456 | 786 | 0 |
| GT032792 | 325 | 456 | 780 | 0 |
| GT051618 | 330 | 483 | 811 | 0 |
| JG911986 | 282 | 453 | 734 | 0 |
| GT045992 | 338 | 470 | 806 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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