| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si028962m |
| Family | GH35 |
| Protein Properties | Length: 805 Molecular Weight: 90111.5 Isoelectric Point: 6.8872 |
| Chromosome | Chromosome/Scaffold: 2 Start: 38614150 End: 38619895 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 44 | 347 | 0 |
| LMIDGKRDLFFSGAIHYPRSPPEMWPKLIERAKEGGLNTIETYVFWNAHEPEPGKYNFEGRLDLIKYIKMIQDHGMYAIVRIGPFIQAEWNHGGLPYWLR EIGHIIFRANNEAFKKEMEKFVRFIVQKLKDAELFASQGGPIILTQIENEYGNIKKDHKTEGDKYLEWAAQMALSTQTGVPWIMCKQSSAPGEVIPTCNG RHCGDTWTLLDKDKPMLWTENWTAQFRAYGDQLAMRSAEDIAYAVLRFFAKGGSLVNYYMYHGGTNFGRTGASYVLTGYYDEAPMDEYGMCKEPKFGHLR DLHN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 805 Download |
| MTVVRAAAVL VAAAALAILL PGWAAAEWSL TKKGSIVTYD GRSLMIDGKR DLFFSGAIHY 60 PRSPPEMWPK LIERAKEGGL NTIETYVFWN AHEPEPGKYN FEGRLDLIKY IKMIQDHGMY 120 AIVRIGPFIQ AEWNHGGLPY WLREIGHIIF RANNEAFKKE MEKFVRFIVQ KLKDAELFAS 180 QGGPIILTQI ENEYGNIKKD HKTEGDKYLE WAAQMALSTQ TGVPWIMCKQ SSAPGEVIPT 240 CNGRHCGDTW TLLDKDKPML WTENWTAQFR AYGDQLAMRS AEDIAYAVLR FFAKGGSLVN 300 YYMYHGGTNF GRTGASYVLT GYYDEAPMDE YGMCKEPKFG HLRDLHNVIR SYQKAFLTGE 360 HSSEKLGHGY EAHTFELPED NLCLSFLSNN NTGEDGTVTF RGEKHYVPSR SVSILAGCKN 420 VVYNTKRVFV QHSERSFHTS EVTSKNKSWE MYSEQIPKFH KTKVRTKEPL EQYNQTKDAS 480 DYLWYTTSFR LESDDLPFRG DIRPVLQVKS TAHSMVGFAN DAFVGSGRGS KQVKGFMFEK 540 PVDLKVGVNH ITLLSSAMGM KDSGGELAEV KGGIQECLIQ GLNTGTLDLQ VNGWGHKRYF 600 DEPDGDDPVV LDMSSMSKGM IYVNGEGIGR YWVSYRTLDG TPSQALYHIP RPFLKSKDNL 660 LVVFEEEMGK PDGILVQTVT RDDICVLLSE HNPAQIKTWD TDGDKIKLIA EDHSTRGTLS 720 CPPKKTIQEV VFASFGNPEG MCGNFTVGTC HTPNAKQVVE KECLGKPSCV LPVEHTLYGA 780 DINCPSTTAT LGVQVRCSWE KKGA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 2.0e-9 | 64 | 195 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 1.0e-18 | 719 | 797 | 82 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 4.0e-24 | 37 | 214 | 185 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-140 | 43 | 349 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 37 | 798 | 825 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAG30724.1 | 0 | 26 | 797 | 24 | 825 | putative beta-galactosidase precursor [Hordeum vulgare] |
| GenBank | EEC84965.1 | 0 | 27 | 797 | 26 | 799 | hypothetical protein OsI_32205 [Oryza sativa Indica Group] |
| GenBank | EEE70132.1 | 0 | 27 | 797 | 26 | 830 | hypothetical protein OsJ_30164 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q0IZZ8 | 0 | 27 | 795 | 26 | 828 | BGL12_ORYSJ RecName: Full=Beta-galactosidase 12; Short=Lactase 12; Flags: Precursor |
| RefSeq | XP_002460584.1 | 0 | 29 | 804 | 28 | 803 | hypothetical protein SORBIDRAFT_02g031260 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 5.04467e-44 | 43 | 345 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.003 | 611 | 665 | 525 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 7e-37 | 31 | 355 | 5 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 7e-37 | 31 | 355 | 5 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 7e-37 | 31 | 355 | 5 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
