Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si029123m |
Family | GT8 |
Protein Properties | Length: 683 Molecular Weight: 77481.5 Isoelectric Point: 9.3476 |
Chromosome | Chromosome/Scaffold: 2 Start: 38214178 End: 38218367 |
Description | galacturonosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 340 | 655 | 0 |
CLSMRLTIDYYLLPLEQRKFPRSENLENPSLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWL NSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSNLKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWDVDLNGKVNGAVETCGESF HRFDKYLNFSNPHIAQNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDG AAVVHYNGNMKPWLEL |
Full Sequence |
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Protein Sequence Length: 683 Download |
MPTPKQRLPY STAGAGGGGR RAASGSGVLP PVVVLVFLFV VAPSLFFVVR NGGRGHVHVA 60 SDPKGRNGDQ EAVTMKNLKS ILPKEVIDAI TASQQEAGTL SLDFFRNHES PSWKTDDLVT 120 DMSMYVDGKA NDENSVPEHD LPTNKSPKDS DEHQVDTAAK IARRKLREKR REKRAMELVR 180 KDDEARVKLE NAAIERSKAV DSAVLGKYSI WRKENENENS DSTVRLMRDQ LIMARVYSAL 240 AKSKNKSGLF QELQTRIKES QRAVGEAAAD ADLHHSAPEK VRAMGQVLSK ARGELYDCRA 300 ITQRLRAMLQ SADEQVRSLK KQSTFLSQLA AKTIPNSIHC LSMRLTIDYY LLPLEQRKFP 360 RSENLENPSL YHYALFSDNV LAASVVVNST IMNAKEPEKH VFHLVTDKLN FGAMNMWFLL 420 NPPGKATIHV ENVDEFKWLN SSYCPVLRQL ESAAMKEYYF KADRPTTLSA GSSNLKYRNP 480 KYLSMLNHLR FYLPEVYPKL DKILFLDDDI VVQKDLTGLW DVDLNGKVNG AVETCGESFH 540 RFDKYLNFSN PHIAQNFDPN ACGWAYGMNI FDLKEWKKKD ITGIYHKWQN MNEDRVLWKL 600 GTLPPGLLTF YKLTHPLDKS WHVLGLGYNP SIDRSEIDGA AVVHYNGNMK PWLELAMTKY 660 RPYWTKYIKY DHPYIRGCNL SE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02910 | PLN02910 | 0 | 176 | 682 | 507 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 181 | 680 | 504 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 219 | 681 | 468 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 224 | 679 | 460 | + galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 220 | 682 | 466 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38820.1 | 0 | 56 | 682 | 49 | 681 | unnamed protein product [Vitis vinifera] |
GenBank | EEC84934.1 | 0 | 50 | 682 | 55 | 695 | hypothetical protein OsI_32147 [Oryza sativa Indica Group] |
RefSeq | NP_001063757.1 | 0 | 50 | 682 | 55 | 695 | Os09g0531900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002272447.1 | 0 | 56 | 682 | 97 | 729 | PREDICTED: similar to GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Vitis vinifera] |
RefSeq | XP_002462717.1 | 0 | 1 | 682 | 1 | 683 | hypothetical protein SORBIDRAFT_02g030820 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.000005 | 479 | 652 | 75 | 252 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1g9r_A | 0.000005 | 479 | 652 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.00003 | 479 | 608 | 75 | 196 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |