Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si029152m |
Family | GT8 |
Protein Properties | Length: 664 Molecular Weight: 75415.1 Isoelectric Point: 9.2895 |
Chromosome | Chromosome/Scaffold: 2 Start: 35122244 End: 35125751 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 325 | 635 | 0 |
CLTLRLTNEYYFTNPKNKDFPYAEKLEDPKLYHYALFSDNVLAAAVVVNSTLVHAKKPENHVFHIVTDRLNYAAMKMWFLANPLGKAAIQVQNIEEFTWL NSTYSPVLKQLESRFMIDYYFRNGHARPDENPKFRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDTVVQRDLTALWLVDLKGKVNGAVETCRETFHRFD KYLNFSNPLIAKNFDPHACGWAYGMNIFDLSEWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNEKDIRRAAVI HYNGNLKPWLE |
Full Sequence |
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Protein Sequence Length: 664 Download |
MREVASAAFD REDAPNLVWP QIAASLAKDL TIERLGEHKN RVLSATDHWQ AVEGASSRSR 60 VPGKPDASVL REESETRNAD EEDAPVIEGN ERARLGQGGV IKQVVGSEAS ADGFGEPRDG 120 KEAVLQNGEE VGIKLLHPID AEHKEGSDEA GENIVSGMHT VGNLNSSSSE TRDATTSRKH 180 QTRVSNNNSA RSTANRSAGR STTSPDATIH IIKDQLTRAK TYLGFVASRG NHGFARELRA 240 RMRDIQQALG DATSDRQLPQ NVHSKIRAME QTLVKVRKIH DSCSGAVNRL RTVLHSTEQQ 300 LESNKRQANY LAQVAAKSLP KGLHCLTLRL TNEYYFTNPK NKDFPYAEKL EDPKLYHYAL 360 FSDNVLAAAV VVNSTLVHAK KPENHVFHIV TDRLNYAAMK MWFLANPLGK AAIQVQNIEE 420 FTWLNSTYSP VLKQLESRFM IDYYFRNGHA RPDENPKFRN PKYLSILNHL RFYLPEIFPK 480 LNKVLFLDDD TVVQRDLTAL WLVDLKGKVN GAVETCRETF HRFDKYLNFS NPLIAKNFDP 540 HACGWAYGMN IFDLSEWRKQ NITEVYHTWQ KLNENRLLWK LGTLPAGLVT FWNRTFPLDR 600 SWHQLGLGYN PNVNEKDIRR AAVIHYNGNL KPWLEIGLPK YRKYWSRHVD FDQVFLRECN 660 INP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 0 | 205 | 663 | 459 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 206 | 662 | 461 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 214 | 661 | 454 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 206 | 661 | 459 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ19325.1 | 0 | 4 | 663 | 41 | 697 | glycosyl transferase-like protein [Triticum aestivum] |
EMBL | CAJ26362.1 | 0 | 4 | 663 | 43 | 689 | glycosyl transferase-like protein [Brachypodium sylvaticum] |
GenBank | EAZ09508.1 | 0 | 4 | 663 | 43 | 679 | hypothetical protein OsI_31783 [Oryza sativa Indica Group] |
RefSeq | NP_001063487.1 | 0 | 4 | 663 | 44 | 707 | Os09g0480400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002460421.1 | 0 | 4 | 663 | 43 | 705 | hypothetical protein SORBIDRAFT_02g027840 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.0006 | 460 | 633 | 75 | 252 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 1g9r_A | 0.0006 | 460 | 633 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.001 | 460 | 633 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795725 | 453 | 212 | 664 | 0 |
DR820691 | 278 | 311 | 588 | 0 |
GO877937 | 291 | 374 | 664 | 0 |
DW237421 | 316 | 322 | 637 | 0 |
GO877254 | 323 | 287 | 609 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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